RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 GOLGA8TH3BQL2 631 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 LIASO43766 372 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 CTSVO60911 334 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 ADAM11O75078 769 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 IPO7O95373 1038 aaKnown RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 OR56A5P0C7T3 313 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 VAMP1P23763 118 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 PSMA3P25788 255 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 ITGA3P26006 1051 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 NMBRP28336 390 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 OR1D4P47884 311 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 GLRBP48167 497 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 RRADP55042 308 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SESN2P58004 480 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 VSX2P58304 361 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 PRAMEP78395 509 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 DCDP81605 110 aaKnown RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SSPNQ14714 243 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 OASLQ15646 514 aaKnown RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SLC5A12Q1EHB4 618 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 P3H1Q32P28 736 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 HP1BP3Q5SSJ5 553 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 VWA5B1Q5TIE3 1220 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 FIGLAQ6QHK4 219 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 AFTPHQ6ULP2 937 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 TTLL10Q6ZVT0 673 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 ACAD11Q709F0 780 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 MCATQ8IVS2 390 aaKnown RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SULF2Q8IWU5 870 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SLC22A15Q8IZD6 547 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 GALNT16Q8N428 558 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 UBL4BQ8N7F7 174 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 OR2Y1Q8NGV0 311 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 OR4L1Q8NH43 312 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 HES6Q96HZ4 224 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 PPP1R2P1Q96PQ5 205 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 MIPEPQ99797 713 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 BAG1Q99933 345 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 TRIM56Q9BRZ2 755 aaKnown RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 NDC1Q9BTX1 674 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SYNPO2LQ9H987 977 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 SLC6A20Q9NP91 592 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 CHRAC1Q9NRG0 131 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 IL1RAPL1Q9NZN1 696 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-211ENST00000561010 PLCL2Q9UPR0 1127 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 TCAF1Q9Y4C2 921 aa6.93□□□□□ -1.3
GABPB1-211ENST00000561010 INTS1Q8N201 2190 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 LOC105369274A0A096LPK9 316 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 LOC102723532A0A0G2JNH3 316 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 HEATR9A2RTY3 570 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 E7EVH7 732 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 PEX12O00623 359 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 SOCS6O14544 535 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 PSMD3O43242 534 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 GPC4O75487 556 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CBX6O95503 412 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 STATHP02808 62 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 APRTP07741 180 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CELA3AP09093 270 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 HBQ1P09105 142 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CD9P21926 228 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 NME2P22392 152 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 RPL22P35268 128 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 RAB28P51157 221 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 EIF3BP55884 814 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 Q0VFX4 171 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CDH17Q12864 832 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 FASTKQ14296 549 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 KIR2DS3Q14952 304 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 POU4F3Q15319 338 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 SF1Q15637 639 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CYP2A13Q16696 494 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 FASTKD1Q53R41 847 aaKnown RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 FRMPD2BQ6IN97 320 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 TLDC1Q6P9B6 456 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CNSTQ6PJW8 725 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 LINC00523Q86TU6 105 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 IQCKQ8N0W5 287 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 OR4N4Q8N0Y3 316 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 SHISA5Q8N114 240 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CLEC1AQ8NC01 280 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 DENND1AQ8TEH3 1009 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 SKA2Q8WVK7 121 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 PTERQ96BW5 349 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 C8orf44Q96CB5 159 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CNDP1Q96KN2 507 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 C19orf43Q9BQ61 176 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 DPH2Q9BQC3 489 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 DHRS4Q9BTZ2 278 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 ACAT2Q9BWD1 397 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 ILKAPQ9H0C8 392 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CUTCQ9NTM9 273 aa6.92□□□□□ -1.3
GABPB1-211ENST00000561010 CATSPERZQ9NTU4 200 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 873.7 ms