RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MC4RP32245 332 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 TGM4P49221 684 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 DMC1Q14565 340 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 PARP15Q460N3 678 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 INO80DQ53TQ3 878 aaPredicted RBP16.02■□□□□ 0.16
TPM1-228ENST00000560975 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 ST13P5Q8NFI4 369 aaPredicted RBP16.02■□□□□ 0.16
TPM1-228ENST00000560975 OR5H6Q8NGV6 325 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 HRASLS5Q96KN8 279 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 EGLN2Q96KS0 407 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 CNPPD1Q9BV87 410 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 SMURF1Q9HCE7 757 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 ELOVL2Q9NXB9 296 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 PCDHB5Q9Y5E4 795 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 ANKRD36A6QL64 1941 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 C12orf71A8MTZ7 269 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 H3BM21 787 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 ITGA2P17301 1181 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 MS4A13Q5J8X5 152 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 SLC7A6Q92536 515 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 GDF15Q99988 308 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 KCNH6Q9H252 994 aa16.02■□□□□ 0.15
TPM1-228ENST00000560975 A0A1W2PQ09 198 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 OR6C70A6NIJ9 312 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 HAS3O00219 553 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 RFXANKO14593 260 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 WNT9AO14904 365 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 FFAR2O15552 330 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 IL7P13232 177 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 AQP1P29972 269 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 RRM2P31350 389 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 ETV6P41212 452 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 SMARCB1Q12824 385 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 PCBP2Q15366 365 aaKnown RBP eCLIP16.01■□□□□ 0.152e-12■■■■□ 19.4
TPM1-228ENST00000560975 GPAT3Q53EU6 434 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 VN1R5Q7Z5H4 357 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 FAM217AQ8IXS0 508 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 VANGL1Q8TAA9 524 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 SNAPC3Q92966 411 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 MCCC1Q96RQ3 725 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 MICAL3Q7RTP6 2002 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 EFCAB10A6NFE3 127 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 WASH4PA8MWX3 477 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 TACR1P25103 407 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 TIE1P35590 1138 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 PBX3P40426 434 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 USP39Q53GS9 565 aaKnown RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 C10orf62Q5T681 223 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 FAHD1Q6P587 224 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 ZNF605Q86T29 641 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 RASAL3Q86YV0 1011 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 OR52J3Q8NH60 311 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 PEX13Q92968 403 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 ABCB8Q9NUT2 735 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 SLC6A14Q9UN76 642 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 TNPO3Q9Y5L0 923 aaKnown RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 TBX18O95935 607 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 FHP07954 510 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 SMPD1P17405 629 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 RPS14P62263 151 aaKnown RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 SNRPD2P62316 118 aaKnown RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 OR4F3Q6IEY1 312 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 FBXL22Q6P050 247 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 LAX1Q8IWV1 398 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 OR10T2Q8NGX3 314 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 ULK4Q96C45 1275 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 RPRD1AQ96P16 312 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 ZNF717Q9BY31 904 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 PRDM5Q9NQX1 630 aaPredicted RBP16.01■□□□□ 0.15
TPM1-228ENST00000560975 DYRK4Q9NR20 520 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 TMEM184CQ9NVA4 438 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 TMEM248Q9NWD8 314 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 PCDHGB2Q9Y5G2 931 aa16.01■□□□□ 0.15
TPM1-228ENST00000560975 LTBP4Q8N2S1 1624 aa16■□□□□ 0.15
TPM1-228ENST00000560975 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
TPM1-228ENST00000560975 LOC730098B7Z3J9 87 aa16■□□□□ 0.15
TPM1-228ENST00000560975 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
TPM1-228ENST00000560975 SLC28A1O00337 649 aa16■□□□□ 0.15
TPM1-228ENST00000560975 TAPBPO15533 448 aa16■□□□□ 0.15
TPM1-228ENST00000560975 UGT2B17O75795 530 aa16■□□□□ 0.15
TPM1-228ENST00000560975 C9P02748 559 aa16■□□□□ 0.15
TPM1-228ENST00000560975 OR1E1P30953 314 aa16■□□□□ 0.15
TPM1-228ENST00000560975 KDELR2P33947 212 aa16■□□□□ 0.15
TPM1-228ENST00000560975 TBX4P57082 545 aa16■□□□□ 0.15
TPM1-228ENST00000560975 CSNK2BP67870 215 aa16■□□□□ 0.15
TPM1-228ENST00000560975 DOC2BQ14184 412 aa16■□□□□ 0.15
TPM1-228ENST00000560975 CPSF6Q16630 551 aaKnown RBP eCLIP16■□□□□ 0.15
TPM1-228ENST00000560975 PTCHD3Q3KNS1 767 aa16■□□□□ 0.15
TPM1-228ENST00000560975 SBSNQ6UWP8 590 aa16■□□□□ 0.15
TPM1-228ENST00000560975 MIB1Q86YT6 1006 aa16■□□□□ 0.15
TPM1-228ENST00000560975 PAF1Q8N7H5 531 aa16■□□□□ 0.15
TPM1-228ENST00000560975 FEVQ99581 238 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms