RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PCDHGA4Q9Y5G9 962 aa14.87□□□□□ -0.03
RABGGTA-219ENST00000560871 PABPN1LA6NDY0 278 aaKnown RBP14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 E7EQ34 232 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 CCND1P24385 295 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 CNTFP26441 200 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 RORAP35398 523 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 STAT5AP42229 794 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 MSH2P43246 934 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 IRF9Q00978 393 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 SLC29A2Q14542 456 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 TGFBIQ15582 683 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 WDR93Q6P2C0 686 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 LCTLQ6UWM7 567 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 CCDC91Q7Z6B0 441 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 KLHDC8AQ8IYD2 350 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 CACNA2D3Q8IZS8 1091 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 ZNF843Q8N446 348 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 ESX1Q8N693 406 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 SLC38A9Q8NBW4 561 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 GALNT6Q8NCL4 622 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 ATL1Q8WXF7 558 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 KIAA1191Q96A73 305 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 PYCR2Q96C36 320 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 MED8Q96G25 268 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 OR4K3Q96R72 315 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 EURLQ9NYK6 297 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 FETUBQ9UGM5 382 aa14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 V9GYY5 206 aaPredicted RBP14.86□□□□□ -0.03
RABGGTA-219ENST00000560871 AHCTF1Q8WYP5 2266 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 A0A087X1B8 175 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 A0A096LPK6 155 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LOC101059948A0A1B0GTJ6 334 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 TERTO14746 1132 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 OR2B3O76000 313 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 NTRK1P04629 796 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ANXA5P08758 320 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LTA4HP09960 611 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 SLC6A12P48065 614 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ABHD18Q0P651 414 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 GPS2Q13227 327 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LY6DQ14210 128 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZC3H12BQ5HYM0 836 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 THEMIS2Q5TEJ8 643 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZNF385CQ66K41 422 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 FRMPD2BQ6IN97 320 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 CAPN13Q6MZZ7 669 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ADGRD1Q6QNK2 874 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 C6orf15Q6UXA7 325 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZNF517Q6ZMY9 492 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 TAOK1Q7L7X3 1001 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 TBC1D1Q86TI0 1168 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ISCA2Q86U28 154 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 MCATQ8IVS2 390 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 IL22RA1Q8N6P7 574 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZSCAN1Q8NBB4 408 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 PDPRQ8NCN5 879 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 KCTD4Q8WVF5 259 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 N4BP2L2Q92802 583 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 RHBDF1Q96CC6 855 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LRFN5Q96NI6 719 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ATOH8Q96SQ7 321 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZFYVE21Q9BQ24 234 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 SEMA4CQ9C0C4 833 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 SPRTNQ9H040 489 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 PCBD2Q9H0N5 130 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 LHX9Q9NQ69 397 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ABCF3Q9NUQ8 709 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 PCMTD2Q9NV79 361 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 SERTAD3Q9UJW9 196 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ACOT9Q9Y305 439 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 IKBKGQ9Y6K9 419 aa14.85□□□□□ -0.03
RABGGTA-219ENST00000560871 ZSCAN9O15535 394 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ZNF749O43361 778 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 KRT38O76015 456 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 MT-ND3P03897 115 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ITGB2P05107 769 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 LIFP15018 202 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 EZRP15311 586 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 TFEBP19484 476 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 TYK2P29597 1187 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 HNMTP50135 292 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ERCC6LQ2NKX8 1250 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 PTCHD3Q3KNS1 767 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 RHBDD2Q6NTF9 364 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 GPR135Q8IZ08 494 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 DSELQ8IZU8 1212 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 NXNL1Q96CM4 212 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 EGFL8Q99944 293 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 TMEM79Q9BSE2 394 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ALG9Q9H6U8 611 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ACTR5Q9H9F9 607 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 AKIRIN1Q9H9L7 192 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 ATMQ13315 3056 aa14.84□□□□□ -0.03
RABGGTA-219ENST00000560871 A0A0J9YVX5 310 aa14.83□□□□□ -0.04
RABGGTA-219ENST00000560871 FITM1A5D6W6 292 aa14.83□□□□□ -0.04
RABGGTA-219ENST00000560871 TRIM49D1C9J1S8 452 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms