RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NCLNQ969V3 563 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MED30Q96HR3 178 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PYURFQ96I23 114 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 C3orf30Q96M34 536 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 AGAP4Q96P64 663 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 THUMPD3Q9BV44 507 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 POLR1EQ9GZS1 481 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 NXF2Q9GZY0 626 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 TMEM245Q9H330 911 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SP110Q9HB58 689 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 NTN4Q9HB63 628 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 C3orf14Q9HBI5 128 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 NEK6Q9HC98 313 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 FBRSL1Q9HCM7 1045 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ASAH2Q9NR71 780 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PLCXD1Q9NUJ7 323 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 DCAF13Q9NV06 445 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 GDE1Q9NZC3 331 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PHF11Q9UIL8 331 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 TRMT6Q9UJA5 497 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 KIF26AQ9ULI4 1882 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 INVSQ9Y283 1065 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 TRAPPC4Q9Y296 219 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 BTBD3Q9Y2F9 522 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 HS3ST4Q9Y661 456 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 USP24Q9UPU5 2620 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 LOC285095A0A1B0GVY8 99 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PRR23AA6NEV1 266 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 C2orf81A6NN90 581 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 DRGXA6NNA5 263 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 TTC34A8MYJ7 566 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 E9PAM4 449 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PTGES3LE9PB15 166 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FAM72CH0Y354 149 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 I6L893 689 aaPredicted RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 UPK1AO00322 258 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 WNT9AO14904 365 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 AIREO43918 545 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PDE9AO76083 593 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CLIC3O95833 236 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 HLA-DQB2P05538 268 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 YES1P07947 543 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 SERPINF2P08697 491 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 BMP4P12644 408 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CD36P16671 472 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 HDCP19113 662 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ACVR2AP27037 513 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ETFBP38117 255 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 DDOSTP39656 456 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 DCTP40126 519 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CTSKP43235 329 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 MAGEA2P43356 314 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 MAPKAPK2P49137 400 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PGFP49763 221 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 RGS4P49798 205 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 RAB25P57735 213 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CHRNEQ04844 493 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 IL10RBQ08334 325 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ITKQ08881 620 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FCHO2Q0JRZ9 810 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 SELENBP1Q13228 472 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 AQP6Q13520 282 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 HTR4Q13639 388 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ELOAQ14241 798 aaKnown RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PCBP2Q15366 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 SMAD1Q15797 465 aaKnown RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 MEP1AQ16819 746 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ZFP69Q49AA0 526 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 MS4A13Q5J8X5 152 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PRSS36Q5K4E3 855 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 C6orf136Q5SQH8 315 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FAM72AQ5TYM5 149 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FAM72DQ6L9T8 149 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CYP20A1Q6UW02 462 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 PARM1Q6UWI2 310 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CYHR1Q6ZMK1 362 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FAM72BQ86X60 149 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 GPSM1Q86YR5 675 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ARHGAP12Q8IWW6 846 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 NPAS3Q8IXF0 933 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FBXL6Q8N531 539 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 TEX26Q8N6G2 289 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 C1orf52Q8N6N3 182 aaKnown RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF548Q8NEK5 533 aaPredicted RBP8.32□□□□□ -1.08
CCDC33-209ENST00000560565 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 CAPSLQ8WWF8 208 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 FGF14Q92915 247 aa8.32□□□□□ -1.08
CCDC33-209ENST00000560565 TCEAL4Q96EI5 215 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms