RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TBL1YQ9BQ87 522 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 KIFC1Q9BW19 673 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 KLHL25Q9H0H3 589 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 STMN4Q9H169 189 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 MRM3Q9HC36 420 aaKnown RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 MOCS1Q9NZB8 636 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 BFARQ9NZS9 450 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 NFKBIL1Q9UBC1 381 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 DHCR7Q9UBM7 475 aaKnown RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 ZC3H7BQ9UGR2 993 aaKnown RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 ZNF180Q9UJW8 692 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 ZNF711Q9Y462 761 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 HEBP2Q9Y5Z4 205 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 DNMT3AQ9Y6K1 912 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-215ENST00000560424 NUP210LQ5VU65 1888 aa8.93□□□□□ -0.98
SMAD3-215ENST00000560424 SEC16AO15027 2179 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 CCDC88CQ9P219 2028 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TCRBV9S1A1TA0A576 114 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 C2orf74A8MZ97 194 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ZSCAN9O15535 394 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 AVILO75366 819 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 USP1O94782 785 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 MT-CYBP00156 380 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 AGTP01019 485 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 PIRTP0C851 137 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 PIM1P11309 404 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 KLK2P20151 261 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ALAS2P22557 587 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ATP5DP30049 168 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 AKT1P31749 480 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 WNT3AP56704 352 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 FOXL2P58012 376 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 CSNK1G2P78368 415 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ADORA2A-AS1P86434 159 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 NIPAL4Q0D2K0 466 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 KRT71Q3SY84 523 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 NKAIN1Q4KMZ8 207 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 KHDC1Q4VXA5 237 aaKnown RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 SPANXN3Q5MJ09 141 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 LDLRAP1Q5SW96 308 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TMEM220Q6QAJ8 160 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 UNC5AQ6ZN44 842 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 FAM83HQ6ZRV2 1179 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 CDHR3Q6ZTQ4 885 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TGIF2LYQ8IUE0 185 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 IGDCC3Q8IVU1 814 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TAB3Q8N5C8 712 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ACVR1CQ8NER5 493 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 OR52K1Q8NGK4 314 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 OR2W6PQ8NHA6 318 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 DNAJB8Q8NHS0 232 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 SPATA22Q8NHS9 363 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 CA5BP1Q8WTZ4 195 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TLCD1Q96CP7 247 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 C19orf43Q9BQ61 176 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TRIM56Q9BRZ2 755 aaKnown RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 VPS37BQ9H9H4 285 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 PLAC1Q9HBJ0 212 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 MAGEE1Q9HCI5 957 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 BPIFA1Q9NP55 256 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 SEMA3GQ9NS98 782 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ABI3Q9P2A4 366 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ACSL5Q9ULC5 683 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 RIMKLBQ9ULI2 386 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 SOX13Q9UN79 622 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 CHMP2BQ9UQN3 213 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 MRPS2Q9Y399 296 aaKnown RBP8.92□□□□□ -0.98
SMAD3-215ENST00000560424 ACTL7BQ9Y614 415 aa8.92□□□□□ -0.98
SMAD3-215ENST00000560424 TACC2O95359 2948 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 EXOC1LA0A1B0GW35 172 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 KLHL33A6NCF5 533 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 FAM159BA6NKW6 160 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 BANF1O75531 89 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 MLYCDO95822 493 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 POLBP06746 335 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 PVRP15151 417 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 MSH3P20585 1137 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 PSMA3P25788 255 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 SSTR1P30872 391 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 MSLNQ13421 630 aaPredicted RBP8.91□□□□□ -0.98
SMAD3-215ENST00000560424 SLC1A5Q15758 541 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 PCSK7Q16549 785 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 C3AR1Q16581 482 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 DEFB110Q30KQ9 67 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 ATP13A5Q4VNC0 1218 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 TTMPQ5BVD1 217 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 PCID2Q5JVF3 399 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 UBAP2Q5T6F2 1119 aaKnown RBP8.91□□□□□ -0.98
SMAD3-215ENST00000560424 METRNLQ641Q3 311 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 TLDC1Q6P9B6 456 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 NLRP9Q7RTR0 991 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 EID3Q8N140 333 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 ZNF655Q8N720 491 aaPredicted RBP8.91□□□□□ -0.98
SMAD3-215ENST00000560424 RASGEF1AQ8N9B8 481 aa8.91□□□□□ -0.98
SMAD3-215ENST00000560424 C19orf47Q8N9M1 422 aaKnown RBP8.91□□□□□ -0.98
SMAD3-215ENST00000560424 DNAAF3Q8N9W5 541 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms