RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MLLT1Q03111 559 aaPredicted RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP3-213ENST00000559711 TIGD2Q4W5G0 525 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 SAMD4BQ5PRF9 694 aaKnown RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 KIAA0895LQ68EN5 471 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 LPCAT2Q7L5N7 544 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 ABI3BPQ7Z7G0 1075 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 RNF175Q8N4F7 328 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 HUS1BQ8NHY5 278 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 TOE1Q96GM8 510 aaKnown RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 FERD3LQ96RJ6 166 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 MTERF1Q99551 399 aaKnown RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 CLMPQ9H6B4 373 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 LTB4R2Q9NPC1 389 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 C2orf42Q9NWW7 574 aa12.25□□□□□ -0.45
USP3-213ENST00000559711 SUCOQ9UBS9 1254 aaKnown RBP12.25□□□□□ -0.45
USP3-213ENST00000559711 PRORSD1PA6NEY8 169 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 MAGEB17A8MXT2 336 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 H0Y3Z8 333 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 ACOT8O14734 319 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 BCAS2O75934 225 aaPredicted RBP12.24□□□□□ -0.45
USP3-213ENST00000559711 SLC6A2P23975 617 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 GCKP35557 465 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 NUDT1P36639 197 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 SLC7A2P52569 658 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 MS4A2Q01362 244 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 TSTA3Q13630 321 aaPredicted RBP12.24□□□□□ -0.45
USP3-213ENST00000559711 NFYCQ13952 458 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 RCN1Q15293 331 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 RPE65Q16518 533 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 HIST2H2ACQ16777 129 aaPredicted RBP12.24□□□□□ -0.45
USP3-213ENST00000559711 SPATS1Q496A3 300 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 THEMIS2Q5TEJ8 643 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 HIST2H2AA3Q6FI13 130 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 ANO7Q6IWH7 933 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 NOXRED1Q6NXP6 359 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 DUS1LQ6P1R4 473 aaKnown RBP12.24□□□□□ -0.45
USP3-213ENST00000559711 ABRAXAS1Q6UWZ7 409 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 PRR23BQ6ZRT6 265 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 FAM129CQ86XR2 697 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 SLC15A3Q8IY34 581 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 RAB42Q8N4Z0 105 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 RNF148Q8N7C7 305 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 TSTD1Q8NFU3 115 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 UBE2E3Q969T4 207 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 PDXPQ96GD0 296 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 SHDQ96IW2 340 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 APOLD1Q96LR9 279 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 NELL2Q99435 816 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 SLC39A3Q9BRY0 314 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 PRDM8Q9NQV8 689 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 BCAP29Q9UHQ4 241 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 PCOLCE2Q9UKZ9 415 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 CYP8B1Q9UNU6 501 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 DMTF1Q9Y222 760 aa12.24□□□□□ -0.45
USP3-213ENST00000559711 A0A1W2PPV9 198 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 PIPSLA2A3N6 862 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 MAP3K7O43318 606 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 ZNF217O75362 1048 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 IL6P05231 212 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 SDC1P18827 310 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 CD6P30203 668 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 PIK3CBP42338 1070 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 RABIFP47224 123 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 DGKQP52824 942 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 CLNS1AP54105 237 aaKnown RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 TRAP1Q12931 704 aaKnown RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 CCDC6Q16204 474 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 DLEU7Q6UYE1 221 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 Q6ZSR6 202 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 ADHFE1Q8IWW8 467 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 RIMKLAQ8IXN7 391 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 C2orf73Q8N5S3 287 aaPredicted RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 KRTCAP2Q8N6L1 136 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 ABHD11Q8NFV4 315 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 NUDT8Q8WV74 236 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 CHTF18Q8WVB6 975 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 ASB9Q96DX5 294 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 TMEM74Q96NL1 305 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 HHIPQ96QV1 700 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 NRTNQ99748 197 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 RAB11FIP5Q9BXF6 653 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 PELI2Q9HAT8 420 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 IL1RL2Q9HB29 575 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 S100A14Q9HCY8 104 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 IMP3Q9NV31 184 aaKnown RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 SIRT5Q9NXA8 310 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 PNMA8BQ9ULN7 279 aaPredicted RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 RUVBL1Q9Y265 456 aaKnown RBP12.23□□□□□ -0.45
USP3-213ENST00000559711 PCDHA9Q9Y5H5 950 aa12.23□□□□□ -0.45
USP3-213ENST00000559711 HEBP2Q9Y5Z4 205 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms