RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NSMCE2Q96MF7 247 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 FAM20AQ96MK3 541 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NAP1L5Q96NT1 182 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 C17orf62Q9BQA9 187 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TM6SF1Q9BZW5 370 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SLC39A8Q9C0K1 460 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ZMYND12Q9H0C1 365 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CSTL1Q9H114 145 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 DPH5Q9H2P9 285 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 APOBEC3GQ9HC16 384 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 A4GALTQ9NPC4 353 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PPANQ9NQ55 473 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PRMT8Q9NR22 394 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 FAM118AQ9NWS6 357 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SPHK1Q9NYA1 384 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NINJ2Q9NZG7 142 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NDUFA13Q9P0J0 144 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 HMG20BQ9P0W2 317 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 LRWD1Q9UFC0 647 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SLC12A6Q9UHW9 1150 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TRMT6Q9UJA5 497 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NOCTQ9UK39 431 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 RALYQ9UKM9 306 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CCPG1Q9ULG6 757 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 FAF1Q9UNN5 650 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 AURKCQ9UQB9 309 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 KCNK6Q9Y257 313 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NCKAP1Q9Y2A7 1128 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 AP1M2Q9Y6Q5 423 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF804BA4D1E1 1349 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NPHP3Q7Z494 1330 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 IGLV5-52A0A0A0MRZ9 124 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 A0A0B4J203 849 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 LY6G6EA0A0G2JKS1 128 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 A0A0G2JNG1 304 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TRBV2A0A0J9YWF9 115 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TEX13DA0A0J9YY54 714 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CASTOR2A6NHX0 329 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SLC9B1P1A6NJY1 282 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PRR32B1ATL7 298 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 E5RGE8 158 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF197O14709 1029 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 NDC80O14777 642 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RASGRF2O14827 1237 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 MAGEB2O15479 319 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TEX28O15482 410 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RNASEH1O60930 286 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 NOL3O60936 208 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 LDB3O75112 727 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PRDM1O75626 825 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ATP6AP2O75787 350 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 IFNB1P01574 187 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ACAA1P09110 424 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 HOXC6P09630 235 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CDH1P12830 882 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ETS1P14921 441 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 AREGP15514 252 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF18P17022 549 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 GM2AP17900 193 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 UGT1A6P19224 532 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CDH3P22223 829 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 MARCKSP29966 332 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SFNP31947 248 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CAMLGP49069 296 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 LBX1P52954 281 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PGGT1BP53609 377 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SRP54P61011 504 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 EGR4Q05215 589 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RUNX1T1Q06455 604 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SLC34A1Q06495 639 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ARHGAP1Q07960 439 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 DLG1Q12959 904 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TRA2AQ13595 282 aaKnown RBP eCLIP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KIR2DS5Q14953 304 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 OPCMLQ14982 345 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KARSQ15046 597 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KRT31Q15323 416 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TAF13Q15543 124 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CARTPTQ16568 116 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RAB6CQ53S08 254 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TEX35Q5T0J7 233 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PDSS1Q5T2R2 415 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 LYSMD4Q5XG99 296 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PM20D1Q6GTS8 502 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 OR4A47Q6IF82 309 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FAM166AQ6J272 317 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 GFRALQ6UXV0 394 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 NHLRC1Q6VVB1 395 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 MACC1Q6ZN28 852 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KCTD8Q6ZWB6 473 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CREB3L2Q70SY1 520 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF554Q86TJ5 538 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RTN4RL2Q86UN3 420 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 EXOC3L1Q86VI1 746 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM219Q86XT9 240 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 EID3Q8N140 333 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FBXL14Q8N1E6 418 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 MUC20Q8N307 709 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KDM8Q8N371 416 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CLIP4Q8N3C7 705 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms