RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZXDCQ2QGD7 858 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 COL28A1Q2UY09 1125 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 LCTLQ6UWM7 567 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 RNF44Q7L0R7 432 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 PAQR7Q86WK9 346 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 GPSM1Q86YR5 675 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 OR56A3Q8NH54 315 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 KCTD4Q8WVF5 259 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 KIAA1191Q96A73 305 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 PTERQ96BW5 349 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CRELD1Q96HD1 420 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 SELENOSQ9BQE4 189 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 HAUS8Q9BT25 410 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 SGPP1Q9BX95 441 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 EPB41L4BQ9H329 900 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 ALG9Q9H6U8 611 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 NMRAL1Q9HBL8 299 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CPNE5Q9HCH3 593 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 LHX9Q9NQ69 397 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CUEDC1Q9NWM3 386 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 PADI1Q9ULC6 663 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 SNX7Q9UNH6 387 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 AP1M2Q9Y6Q5 423 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 MGAQ8IWI9 3026 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 A0A096LPK6 155 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 H3BMH7 237 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 H7BY64 318 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-205ENST00000558428 KLK3P07288 261 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-205ENST00000558428 HBQ1P09105 142 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 LIFP15018 202 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 TFEBP19484 476 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 SLC26A3P40879 764 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 HNMTP50135 292 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 CSRP3P50461 194 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-205ENST00000558428 CXADRP78310 365 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 IRF9Q00978 393 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 GPS2Q13227 327 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 PTCHD3Q3KNS1 767 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 TCTE1Q5JU00 501 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 FRMPD2BQ6IN97 320 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 ZNF425Q6IV72 752 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 TLDC1Q6P9B6 456 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 C17orf64Q86WR6 236 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 SLC38A9Q8NBW4 561 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 STAG3L4Q8TBR4 150 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 EXT2Q93063 718 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 RHBDF1Q96CC6 855 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 NXNL1Q96CM4 212 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 LRFN5Q96NI6 719 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 ZFYVE21Q9BQ24 234 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 VPS11Q9H270 941 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 GPN2Q9H9Y4 310 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-205ENST00000558428 IGSF5Q9NSI5 407 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 STARD5Q9NSY2 213 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 CROTQ9UKG9 612 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 RNF112Q9ULX5 631 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 SRPK3Q9UPE1 567 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 CCDC88CQ9P219 2028 aa11.84□□□□□ -0.51
SMAD3-205ENST00000558428 LOC105369274A0A096LPK9 316 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 LOC102723532A0A0G2JNH3 316 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 TRIM49D1C9J1S8 452 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 MEN1O00255 615 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 HAT1O14929 419 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 EFSO43281 561 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 SRPX2O60687 465 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 KRT37O76014 449 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 S100BP04271 92 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 EIF2S1P05198 315 aaKnown RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 SNRPAP09012 282 aaKnown RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 CDH1P12830 882 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 NPPBP16860 134 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 HRH2P25021 359 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 GCAP28676 217 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 DLSTP36957 453 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 VAC14Q08AM6 782 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 COL9A2Q14055 689 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 C18orf21Q32NC0 220 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 LGSNQ5TDP6 509 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 ARHGAP40Q5TG30 622 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 FAM199XQ6PEV8 388 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 ISCA2Q86U28 154 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 THOC6Q86W42 341 aaKnown RBP11.83□□□□□ -0.52
SMAD3-205ENST00000558428 PLD3Q8IV08 490 aa11.83□□□□□ -0.52
SMAD3-205ENST00000558428 DSELQ8IZU8 1212 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms