RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 RNF44Q7L0R7 432 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 TMEM200AQ86VY9 491 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 VRK3Q8IV63 474 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 BEST3Q8N1M1 668 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 TMEM178AQ8NBL3 297 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 OR2L3Q8NG85 312 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 SKA2Q8WVK7 121 aaPredicted RBP16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 VKORC1Q9BQB6 163 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 UTP23Q9BRU9 249 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
TSPAN3-204ENST00000558394 SPG11Q96JI7 2443 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 ABCA2Q9BZC7 2435 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 ASNA1O43681 348 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 OR1I1O60431 355 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 RBP3P10745 1247 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 HOXB4P17483 251 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 CMPK1P30085 196 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 FOXN2P32314 431 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 GRB7Q14451 532 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 BTBD16Q32M84 506 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 ACER2Q5QJU3 275 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 MFSD4BQ5TF39 518 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 TMEM205Q6UW68 189 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 MMP21Q8N119 569 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 TAB3Q8N5C8 712 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 HORMAD2Q8N7B1 307 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 DNAAF3Q8N9W5 541 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 CHDHQ8NE62 594 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 ACTL9Q8TC94 416 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 IMMP1LQ96LU5 166 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 TGIF2Q9GZN2 237 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 LRRC40Q9H9A6 602 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 KCNK13Q9HB14 408 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 C19orf25Q9UFG5 118 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 KLK4Q9Y5K2 254 aa16.89■□□□□ 0.29
TSPAN3-204ENST00000558394 CCDC162PA2VCL2 907 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 H0YGG7 62 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 GPC4O75487 556 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 SEC24DO94855 1032 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 SUN1O94901 812 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 TPM3P06753 285 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 DRD2P14416 443 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 SLC26A3P40879 764 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 ARF3P61204 181 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 OC90Q02509 493 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 TUBA3CQ13748 450 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 OR1C1Q15619 314 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 MEP1AQ16819 746 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 PRTGQ2VWP7 1150 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 FCRLBQ6BAA4 426 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 TUBA3EQ6PEY2 450 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 C3P1Q6ZMU1 363 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 CSNK1A1LQ8N752 337 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 ACBD4Q8NC06 268 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 RERGQ96A58 199 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 FOPNLQ96NB1 174 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 SIGLEC12Q96PQ1 595 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 ZNF559Q9BR84 538 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 TMUB1Q9BVT8 246 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 ANKRD10Q9NXR5 420 aa16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-204ENST00000558394 INTS1Q8N201 2190 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 GOLGA6L19H0YKK7 550 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 PHF2O75151 1096 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 FAM155BO75949 473 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 GAS8O95995 478 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 GARNL3Q5VVW2 1013 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 PLAG1Q6DJT9 500 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 AFTPHQ6ULP2 937 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 LUZP1Q86V48 1076 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 DOLPP1Q86YN1 238 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 MAGEC3Q8TD91 643 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 TREX2Q9BQ50 279 aaPredicted RBP16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 DPH7Q9BTV6 452 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 CARD6Q9BX69 1037 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 DRC3Q9H069 523 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 NHEJ1Q9H9Q4 299 aaPredicted RBP16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 PIH1D1Q9NWS0 290 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 UTP6Q9NYH9 597 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 INTUQ9ULD6 942 aa16.87■□□□□ 0.29
TSPAN3-204ENST00000558394 NIPBLQ6KC79 2804 aaeCLIP16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 ANKHD1Q8IWZ3 2542 aaKnown RBP16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 FAM221AA4D161 298 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 ASPDHA6ND91 283 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 MROH6A6NGR9 719 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 IQCF5A8MTL0 148 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 TXNDC9O14530 226 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 NRP2O60462 931 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 SLCO2B1O94956 709 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 TPM1P09493 284 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 CD96P40200 585 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 BDKRB1P46663 353 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 COPS2P61201 443 aa16.86■□□□□ 0.29
TSPAN3-204ENST00000558394 FASTKQ14296 549 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms