RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 COQ3Q9NZJ6 369 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 TMEM181Q9P2C4 612 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MGAT4BQ9UQ53 548 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 GTPBP1O00178 669 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 LRRTM2O43300 516 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 LCMT2O60294 686 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 DLX3O60479 287 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KRT33AO76009 404 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 UNGP13051 313 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 HSPA7P48741 367 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MLLT6P55198 1093 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SELPLGQ14242 412 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 GK2Q14410 553 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 TCEAL1Q15170 157 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KLHL26Q53HC5 615 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF627Q7L945 461 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZC3HC1Q86WB0 502 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 PTERQ96BW5 349 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 LURAP1Q96LR2 239 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MIR1-1HGQ9H1L0 117 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 THG1LQ9NWX6 298 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 EIF2B4Q9UI10 523 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCDHGB2Q9Y5G2 931 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MST1RQ04912 1400 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 A0A075B6Q4 140 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SOBPA7XYQ1 873 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KELP23276 732 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 EIF2DP41214 584 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MAP2K4P45985 399 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 OAZ1P54368 228 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 S100A10P60903 97 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KIAA1161Q6NSJ0 714 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 CHDHQ8NE62 594 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 CACNG6Q9BXT2 260 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 POTEKPQ9BYX7 375 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 LHPPQ9H008 270 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 NT5DC2Q9H857 520 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ARHGEF4Q9NR80 690 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ABCB8Q9NUT2 735 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 FAM118AQ9NWS6 357 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCDHB3Q9Y5E6 796 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCDH17O14917 1159 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 OIP5O43482 229 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR10H2O60403 315 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 GADD45AP24522 165 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SSR2P43308 183 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF132P52740 706 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 DGKQP52824 942 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 CRISP3P54108 245 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 EPHB3P54753 998 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 FUT2Q10981 343 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 NFIXQ14938 502 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SCGB2B2Q4G0G5 96 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ESCO2Q56NI9 601 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MED27Q6P2C8 311 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 GTPBP8Q8N3Z3 284 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SAMD12Q8N8I0 201 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 DENND1AQ8TEH3 1009 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 LRRN4Q8WUT4 740 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR5B12Q96R08 314 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF416Q9BWM5 594 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 BPIFA1Q9NP55 256 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SH2B3Q9UQQ2 575 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 BAZ2BQ9UIF8 2168 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 C13orf42A0A1B0GVH6 325 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 HSPA12AO43301 675 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC25A14O95258 325 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 C22orf31O95567 290 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 IFNA10P01566 189 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 IFNA4P05014 189 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 HOXC6P09630 235 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 KHKP50053 298 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 CDH11P55287 796 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRR5P85299 388 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NAE1Q13564 534 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 TDGQ13569 410 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 COQ5Q5HYK3 327 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZSWIM9Q86XI8 627 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC43A3Q8NBI5 491 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ACO2Q99798 780 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 GPN2Q9H9Y4 310 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NUFIP1Q9UHK0 495 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 EIF1AYO14602 144 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 EEF1E1O43324 174 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 LYRM1O43325 122 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms