RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 IFI44LQ53G44 452 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MAP1SQ66K74 1059 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TMUB2Q71RG4 321 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TTLL6Q8N841 843 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ACBD4Q8NC06 268 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SRA1Q9HD15 236 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GIMAP2Q9UG22 337 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GJA5P36382 358 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KCNAB2Q13303 367 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KANK2Q63ZY3 851 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 STEAP3Q658P3 488 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PLAG1Q6DJT9 500 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC25A25Q6KCM7 469 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF549Q6P9A3 640 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 DCLRE1AQ6PJP8 1040 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CYS1Q717R9 158 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UFD1Q92890 307 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RRNAD1Q96FB5 475 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SAMD4AQ9UPU9 718 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA31E1Q6ZUB1 1445 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR6C75A6NL08 312 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 HCN1O60741 890 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 UGT2B17O75795 530 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SIX3O95343 332 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CD63P08962 238 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA31D3P0C874 917 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PPIBP23284 216 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PPP2R1BP30154 601 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PNPLA4P41247 253 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GPR15P49685 360 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CCR4P51679 360 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CLCN5P51795 746 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GRAPQ13588 217 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GTF2H2Q13888 395 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CRB2Q5IJ48 1285 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CLEC12AQ5QGZ9 265 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ARMC12Q5T9G4 340 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LIPKQ5VXJ0 399 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GTF2H2CQ6P1K8 395 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA31D4Q6ZUB0 917 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CFAP206Q8IYR0 622 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GRAPLQ8TC17 118 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 OR2M4Q96R27 311 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 QRSL1Q9H0R6 528 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FBRSL1Q9HCM7 1045 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 VSX1Q9NZR4 365 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ERICH3Q5RHP9 1530 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ISM1B1AKI9 464 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM233B4DJY2 109 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 E9PI62 339 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 IFNW1P05000 195 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SREBF1P36956 1147 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SV2CQ496J9 727 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZDHHC17Q8IUH5 632 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LACC1Q8IV20 430 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FAM46DQ8NEK8 389 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM134Q9H6X4 195 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RRAGCQ9HB90 399 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 BPNT1O95861 308 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PCSK6P29122 969 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MOGSQ13724 837 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LYPLAL1Q5VWZ2 237 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PIGZQ86VD9 579 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TBX5Q99593 518 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RAD9AQ99638 391 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ABCG5Q9H222 651 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 VPS28Q9UK41 221 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MEMO1Q9Y316 297 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 H1F0P07305 194 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MVKQ03426 396 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SERPINA12Q8IW75 414 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MINDY1Q8N5J2 469 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RBPMSQ93062 196 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TCEAL4Q96EI5 215 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 EXO5Q9H790 373 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 A0A1W2PRB8 838 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TCAPO15273 167 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 FPR1P21462 350 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GDF10P55107 478 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC6A19Q695T7 634 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CD101Q93033 1021 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLAMF8Q9P0V8 285 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SLC2A6Q9UGQ3 507 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CYTIPO60759 359 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 C7P10643 843 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 IL4RP24394 825 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ADORA2AP29274 412 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ERVFC1P60507 584 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 DUSP6Q16828 381 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PAPD4Q6PIY7 484 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GPC2Q8N158 579 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CCDC54Q8NEL0 328 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 C9orf43Q8TAL5 461 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GPR151Q8TDV0 419 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 COQ4Q9Y3A0 265 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RPS17P08708 135 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MAT2AP31153 395 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 HNF1BP35680 557 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MLLT3P42568 568 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms