RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 APIPQ96GX9 242 aa19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 ACTL8Q9H568 366 aa19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 NOP53Q9NZM5 478 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 BAIAP2L1Q9UHR4 511 aa19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 PCOLCE2Q9UKZ9 415 aa19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 PCDHGA11Q9Y5H2 935 aa19.68■□□□□ 0.74
SNRPA1-205ENST00000558036 ETHE1O95571 254 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 CAPN3P20807 821 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 CD38P28907 300 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 KIAA0040Q15053 153 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 SF1Q15637 639 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 FBXW10Q5XX13 1052 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 MED27Q6P2C8 311 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 WASH2PQ6VEQ5 465 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 C17orf64Q86WR6 236 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 ABCA7Q8IZY2 2146 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 RAB42Q8N4Z0 105 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 GPBAR1Q8TDU6 330 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 HAUS8Q9BT25 410 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 WASH6PQ9NQA3 447 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 SPATA6Q9NWH7 488 aaPredicted RBP19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 TAAR2Q9P1P5 351 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 DLGAP4Q9Y2H0 992 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 COLEC10Q9Y6Z7 277 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 BDP1A6H8Y1 2624 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 SLC22A3O75751 556 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 RSL1D1O76021 490 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 IL12AP29459 219 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 MMEL1Q495T6 779 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 DNAL1Q4LDG9 190 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 PRRT3Q5FWE3 981 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 REP15Q6BDI9 236 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 ZFAND4Q86XD8 727 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 DSELQ8IZU8 1212 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 LIX1Q8N485 282 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 KYQ8NBH2 561 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 CLHC1Q8NHS4 586 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 PROKR1Q8TCW9 393 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 CXorf40BQ96DE9 158 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 WDR34Q96EX3 536 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 TM9SF3Q9HD45 589 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 HEBP2Q9Y5Z4 205 aa19.67■□□□□ 0.74
SNRPA1-205ENST00000558036 LRP4O75096 1905 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 A0A1W2PR77 199 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 H7BY64 318 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 CTSEP14091 401 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 MAGEA9P43362 315 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 ZFP36L2P47974 494 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 MAPRE2Q15555 327 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 TAF8Q7Z7C8 310 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 FAM13CQ8NE31 585 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 OR4E2Q8NGC2 313 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 VPS33AQ96AX1 596 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 APOLD1Q96LR9 279 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 PRAP1Q96NZ9 151 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 EFCAB11Q9BUY7 163 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 EFCAB1Q9HAE3 211 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 SPHK1Q9NYA1 384 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 APOBEC3BQ9UH17 382 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 PACSIN3Q9UKS6 424 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 ZNF839A8K0R7 811 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 JUNDP17535 347 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 RACK1P63244 317 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 PDCD4Q53EL6 469 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 RETREG3Q86VR2 466 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 MFSD2AQ8NA29 543 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 OR2L8Q8NGY9 312 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 SLC25A23Q9BV35 468 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 MRPL1Q9BYD6 325 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 EHD1Q9H4M9 534 aa19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 EIF3LQ9Y262 564 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-205ENST00000558036 ANKRD28O15084 1053 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 NRP2O60462 931 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 RASSF9O75901 435 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 SORBS2O94875 1100 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 BCKDHAP12694 445 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 RPS13P62277 151 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 STX5Q13190 355 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 ART3Q13508 389 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 PAGE2BQ5JRK9 111 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 BLOC1S3Q6QNY0 202 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 OR2A1Q8NGT9 310 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 LCN9Q8WX39 176 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 LRRC61Q9BV99 259 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 GSDMCQ9BYG8 508 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 PCED1AQ9H1Q7 454 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 KIR3DX1Q9H7L2 352 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 VPS29Q9UBQ0 182 aa19.65■□□□□ 0.74
SNRPA1-205ENST00000558036 TLR4O00206 839 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 CFLARO15519 480 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 PEBP1P30086 187 aaKnown RBP19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 CSTF3Q12996 717 aaKnown RBP19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 ICE2Q659A1 982 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 CYB5D1Q6P9G0 228 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 IYDQ6PHW0 289 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 FAM129CQ86XR2 697 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 ULK2Q8IYT8 1036 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 KRTCAP2Q8N6L1 136 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 EBPLQ9BY08 206 aa19.64■□□□□ 0.74
SNRPA1-205ENST00000558036 SLC52A3Q9NQ40 469 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms