RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 C6orf136Q5SQH8 315 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 WASHC2DQ5SRD0 308 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 TPRG1LQ5T0D9 272 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 METRNLQ641Q3 311 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 REP15Q6BDI9 236 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PDZD3Q86UT5 571 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 KBTBD6Q86V97 674 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 THOC6Q86W42 341 aaKnown RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 SCUBE1Q8IWY4 988 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 DEFB107AQ8IZN7 70 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 MIER2Q8N344 545 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 CHCHD4Q8N4Q1 142 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 KYQ8NBH2 561 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PHC3Q8NDX5 983 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 FLCNQ8NFG4 579 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 OR9A1PQ8NGU1 263 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ZNF480Q8WV37 535 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ATL1Q8WXF7 558 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 MCUR1Q96AQ8 359 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 FAM46AQ96IP4 442 aaKnown RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 BMFQ96LC9 184 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 FOPNLQ96NB1 174 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 UHRF1Q96T88 793 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 CCT7Q99832 543 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 MYOCQ99972 504 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 APOOQ9BUR5 198 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 C1orf50Q9BV19 199 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 BRINP2Q9C0B6 783 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 BTBD1Q9H0C5 482 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ACTR8Q9H981 624 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 EBF2Q9HAK2 575 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PHPT1Q9NRX4 125 aaPredicted RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 CCDC167Q9P0B6 97 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 USP36Q9P275 1121 aaKnown RBP7.14□□□□□ -1.27
SPG11-204ENST00000557866 SLC7A8Q9UHI5 535 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PACSIN3Q9UKS6 424 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 PLAGL1Q9UM63 463 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 DUSP12Q9UNI6 340 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 SH2B3Q9UQQ2 575 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 NCKAP1Q9Y2A7 1128 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 WDR37Q9Y2I8 494 aa7.14□□□□□ -1.27
SPG11-204ENST00000557866 ASPDHA6ND91 283 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 GPR89AB7ZAQ6 455 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 E7ENX8 843 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 E7EQ34 232 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 SLC28A1O00337 649 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ANKRD28O15084 1053 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 KMOO15229 486 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 LATO43561 262 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 NRP2O60462 931 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ENTPD5O75356 428 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ULK1O75385 1050 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 RSL1D1O76021 490 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 PDE5AO76074 875 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 PDYNP01213 254 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 HOXC4P09017 264 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 GPR89BP0CG08 455 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ACADMP11310 421 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 G6PDP11413 515 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ACP5P13686 325 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 IDO1P14902 403 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 FOSL2P15408 326 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 MAPK9P45984 424 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 NUDT2P50583 147 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 UFM1P61960 85 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 TAP2Q03519 686 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 EMX2Q04743 252 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 DMPKQ09013 629 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 TBL3Q12788 808 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 CHIT1Q13231 466 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 DOC2AQ14183 400 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 KIAA0040Q15053 153 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ZRSR2Q15696 482 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 CPSF6Q16630 551 aaKnown RBP eCLIP7.13□□□□□ -1.27
SPG11-204ENST00000557866 KIF19Q2TAC6 998 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 AP5B1Q2VPB7 878 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ATP6AP1LQ52LC2 224 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 RFTN2Q52LD8 501 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 PDCD4Q53EL6 469 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 PYCR3Q53H96 274 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 IL23RQ5VWK5 629 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ANKRD34AQ69YU3 496 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 CAPRIN2Q6IMN6 1127 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 C8orf82Q6P1X6 216 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 UNC5DQ6UXZ4 953 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 TRIM69Q86WT6 500 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 RNF175Q8N4F7 328 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 FNDC5Q8NAU1 212 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 OR5AR1Q8NGP9 310 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 OR2T34Q8NGX1 318 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 UBASH3BQ8TF42 649 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 HMGB4Q8WW32 186 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 OR1E3Q8WZA6 343 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 MTFMTQ96DP5 389 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 MED8Q96G25 268 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 IL17FQ96PD4 163 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 TIMM29Q9BSF4 260 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 MENTQ9BUN1 341 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 SGPP1Q9BX95 441 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms