RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TTC27Q6P3X3 843 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 Q6ZS92 163 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CUZD1Q86UP6 607 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 REXO1L1PQ8IX06 675 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 OR11G2Q8NGC1 345 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 PPP4R1Q8TF05 950 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 COG1Q8WTW3 980 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 INPP5DQ92835 1189 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 RERGQ96A58 199 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CNDP1Q96KN2 507 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 NAP1L3Q99457 506 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 PKP4Q99569 1192 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 LHPPQ9H008 270 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 ZBTB20Q9HC78 741 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 FBXO6Q9NRD1 293 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 C3orf18Q9UK00 162 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CDC14AQ9UNH5 594 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 MAD1L1Q9Y6D9 718 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 ANKUB1A6NFN9 424 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 KIF5CO60282 957 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 DDAH2O95865 285 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 SLC16A8O95907 504 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 F7P08709 466 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ZGLP1P0C6A0 271 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ENO3P13929 434 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 SLC1A2P43004 574 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 CLCN7P51798 805 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 EMP3P54852 163 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 CUL1Q13616 776 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 DSG2Q14126 1118 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 PRTGQ2VWP7 1150 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 C4orf17Q53FE4 359 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ICE2Q659A1 982 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ADCK2Q7Z695 626 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 PAQR7Q86WK9 346 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 DENND6AQ8IWF6 608 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 MCUQ8NE86 351 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 CALML6Q8TD86 181 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 KCNJ9Q92806 393 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 THOC3Q96J01 351 aaKnown RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 PBKQ96KB5 322 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 SERPINB12Q96P63 405 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 YIPF2Q9BWQ6 316 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 AGPAT4Q9NRZ5 378 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 C20orf96Q9NUD7 363 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ABCF3Q9NUQ8 709 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 C14orf105Q9NVL8 296 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 STOX2Q9P2F5 926 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 KLHL42Q9P2K6 505 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 TRPC4Q9UBN4 977 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 NOVA2Q9UNW9 492 aaKnown RBP13.95□□□□□ -0.18
SHMT2-235ENST00000557740 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
SHMT2-235ENST00000557740 ZCWPW2A0A1B0GU75 182 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 SMAPO00193 183 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
SHMT2-235ENST00000557740 HPP00738 406 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 ANXA5P08758 320 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 MPC1LP0DKB6 136 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 COILP38432 576 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-235ENST00000557740 ABATP80404 500 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 CTBP1Q13363 440 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 PCM1Q15154 2024 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 LONRF1Q17RB8 773 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 DOPEY1Q5JWR5 2465 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 THEMIS2Q5TEJ8 643 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 FBXO42Q6P3S6 717 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
SHMT2-235ENST00000557740 LMNTD2Q8IXW0 634 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 FBXO15Q8NCQ5 510 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-235ENST00000557740 PPFIBP2Q8ND30 876 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 GIMAP7Q8NHV1 300 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 DNAJB14Q8TBM8 379 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 MVB12AQ96EY5 273 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 SLC30A3Q99726 388 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 FAM167BQ9BTA0 163 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 ZNF160Q9HCG1 818 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 RUVBL1Q9Y265 456 aaKnown RBP13.94□□□□□ -0.18
SHMT2-235ENST00000557740 CSAG2Q9Y5P2 127 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 HIVEP3Q5T1R4 2406 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 UNC79Q9P2D8 2635 aa13.94□□□□□ -0.18
SHMT2-235ENST00000557740 CCDC88CQ9P219 2028 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 IGLV3-12A0A075B6K2 115 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 A1L4Q6 167 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 E7ENX8 843 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 TXNDC9O14530 226 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 CBX6O95503 412 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 UQCRHP07919 91 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 RNF224P0DH78 156 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms