RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GPRC6AQ5T6X5 926 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 RNF219Q5W0B1 726 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 GALNT10Q86SR1 603 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 RASAL3Q86YV0 1011 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 FAM83FQ8NEG4 500 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CAPSLQ8WWF8 208 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 EID2BQ96D98 161 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 GABARAPL3Q9BY60 117 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 SIRT5Q9NXA8 310 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CCDC59Q9P031 241 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PSORS1C1Q9UIG5 152 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PCDHGA6Q9Y5G7 932 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 E9PQ18 207 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 FPGTO14772 594 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 HAT1O14929 419 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CA12O43570 354 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 EPN2O95208 641 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 SPNP16150 400 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 ALOX12P18054 663 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 GTF2E2P29084 291 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 ATP5C1P36542 298 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CASP3P42574 277 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 DEFA1P59665 94 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 DEFA3P59666 94 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 MBOAT1Q6ZNC8 495 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC46A3Q7Z3Q1 461 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 DENND1CQ8IV53 801 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CCDC103Q8IW40 242 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 SYTL1Q8IYJ3 562 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PARP16Q8N5Y8 322 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CHAC2Q8WUX2 184 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF486Q96H40 463 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PANX1Q96RD7 426 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CDK5RAP1Q96SZ6 601 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 EPYCQ99645 322 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC32A1Q9H598 525 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PLCXD1Q9NUJ7 323 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 NOD1Q9Y239 953 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 A0A1B0GVM2 712 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 FZD6O60353 706 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 DPM1O60762 260 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 GPX2P18283 190 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PRPH2P23942 346 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 ARF5P84085 180 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 LYPLAL1Q5VWZ2 237 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 TTC23LQ6PF05 361 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CHST9Q7L1S5 443 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 METTL4Q8N3J2 472 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CDADC1Q9BWV3 514 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 CEP44Q9C0F1 390 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 RMI1Q9H9A7 625 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 RAPGEFL1Q9UHV5 662 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
VIPAS39-211ENST00000557658 MTMR11A4FU01 709 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 DSCR3O14972 297 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 APOA1P02647 267 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 CDK1P06493 297 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 ALPIP09923 528 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 TCEA1P23193 301 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 NR4A2P43354 598 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 RHOAP61586 193 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 MTAPQ13126 283 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 NFATC2Q13469 925 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 FBXO43Q4G163 708 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 ARMC12Q5T9G4 340 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 MLIPQ5VWP3 458 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 NEK5Q6P3R8 708 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 CCBE1Q6UXH8 406 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 MACC1Q6ZN28 852 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 HEATR4Q86WZ0 1026 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC22A15Q8IZD6 547 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 TPD52L3Q96J77 140 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 FAM193BQ96PV7 902 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 REXO4Q9GZR2 422 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 CRISPLD1Q9H336 500 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 ARL15Q9NXU5 204 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 LHX3Q9UBR4 397 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 CRLS1Q9UJA2 301 aa11.46□□□□□ -0.57
VIPAS39-211ENST00000557658 LOC100506127A0A0U1RQW1 187 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 PNMA8CA0A1B0GUJ8 204 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 CLCA1A8K7I4 914 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 MAGEB17A8MXT2 336 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 GAPDHSO14556 408 aaPredicted RBP11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 SCAMP3O14828 347 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 CD160O95971 181 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 VIPP01282 170 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 EPORP19235 508 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms