RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PRAMEF17Q5VTA0 474 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 YOD1Q5VVQ6 348 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PRAMEF13Q5VWM6 474 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CAPN13Q6MZZ7 669 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 RHBDD2Q6NTF9 364 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 AGTRAPQ6RW13 159 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF517Q6ZMY9 492 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ADAMTSL2Q86TH1 951 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CEP97Q8IW35 865 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF655Q8N720 491 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 SLC38A9Q8NBW4 561 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PROKR1Q8TCW9 393 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CT55Q8WUE5 264 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 FBXL8Q96CD0 374 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 MED8Q96G25 268 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CATSPER2Q96P56 530 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ZFYVE21Q9BQ24 234 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 SELENOSQ9BQE4 189 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 FUT8Q9BYC5 575 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 DERL2Q9GZP9 239 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 SPRTNQ9H040 489 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CDC42EP4Q9H3Q1 356 aaKnown RBP11.98□□□□□ -0.49
SLIRP-211ENST00000557623 L2HGDHQ9H9P8 463 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 SLC6A20Q9NP91 592 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ENAMQ9NRM1 1142 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 TXLNGQ9NUQ3 528 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 CTNNAL1Q9UBT7 734 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 FER1L5A0AVI2 2057 aa11.98□□□□□ -0.49
SLIRP-211ENST00000557623 A0A0J9YVX5 310 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 TERTO14746 1132 aaKnown RBP11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CTSVO60911 334 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 KATNA1O75449 491 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RECKO95980 971 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ITGB2P05107 769 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CD63P08962 238 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RAB40ALP0C0E4 278 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RHOXF2BP0C7M4 288 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 EZRP15311 586 aaKnown RBP11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RAB10P61026 200 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CDKL1Q00532 357 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 NAE1Q13564 534 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ZKSCAN8Q15776 578 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-211ENST00000557623 FAM214AQ32MH5 1076 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF425Q6IV72 752 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 LCTLQ6UWM7 567 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 SBSNQ6UWP8 590 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RAPH1Q70E73 1250 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 FRA10AC1Q70Z53 315 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CCDC91Q7Z6B0 441 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 PAQR7Q86WK9 346 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 STARD8Q92502 1023 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 WBP1Q96G27 269 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ZNF285Q96NJ3 590 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ATG10Q9H0Y0 220 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 ACSS3Q9H6R3 686 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CAB39LQ9H9S4 337 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 TMEM184CQ9NVA4 438 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 IL17BQ9UHF5 180 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 OARD1Q9Y530 152 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 CCDC88CQ9P219 2028 aa11.97□□□□□ -0.49
SLIRP-211ENST00000557623 NPEPPSL1A6NEC2 478 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 C9J4A7 227 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 CDC7O00311 574 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 TXNDC9O14530 226 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 PHGDHO43175 533 aaKnown RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 CREG1O75629 220 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 FAM155BO75949 473 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ACSL3O95573 720 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 GUCA1CO95843 209 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ANXA5P08758 320 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 CCDC166P0CW27 439 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 PIM1P11309 404 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 F8A1P23610 371 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 PTPN4P29074 926 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 CRABP2P29373 138 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 HNMTP50135 292 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ATP6V0D1P61421 351 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 DCDP81605 110 aaKnown RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 CDC20Q12834 499 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 PPP1R3AQ16821 1122 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 FBXO42Q6P3S6 717 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 MBOAT1Q6ZNC8 495 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ADCK2Q7Z695 626 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 C17orf64Q86WR6 236 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 OR56A3Q8NH54 315 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ANKRD49Q8WVL7 239 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms