RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CCSER2Q9H7U1 834 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 UTS2RQ9UKP6 389 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 RARRES3Q9UL19 164 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PHF24Q9UPV7 400 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 NUP98P52948 1817 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 TRIM64A6NGJ6 449 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 CDC7O00311 574 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 GADD45GO95257 159 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 ALDOAP04075 364 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 GSTM2P28161 218 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 SLC15A1P46059 708 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 CTBP2P56545 445 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 DSTNP60981 165 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 PYHIN1Q6K0P9 492 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 CIR1Q86X95 450 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 CMASQ8NFW8 434 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 SPATA22Q8NHS9 363 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PCDH19Q8TAB3 1148 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 UFD1Q92890 307 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PCDHB18PQ96TA0 734 aa8.15□□□□□ -1.1
CHD8-213ENST00000557364 PAK6Q9NQU5 681 aaPredicted RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 NOCTQ9UK39 431 aaKnown RBP8.15□□□□□ -1.1
CHD8-213ENST00000557364 GPR89AB7ZAQ6 455 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 CPNE3O75131 537 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 TSC22D2O75157 780 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 HRGP04196 525 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 GPR89BP0CG08 455 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 UNGP13051 313 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 FBLP22087 321 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 NMBRP28336 390 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 BMP8BP34820 402 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 CAPZA1P52907 286 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 DCTN2Q13561 401 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 KIAA0895LQ68EN5 471 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 RINLQ6ZS11 566 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 BMP8AQ7Z5Y6 402 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 ALDH16A1Q8IZ83 802 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 NMD3Q96D46 503 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 HHIPL1Q96JK4 782 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 HDHD5Q9BXW7 423 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 LRRC3Q9BY71 257 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 RAB26Q9ULW5 256 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 MAU2Q9Y6X3 613 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 HAS3O00219 553 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 EIF3FO00303 357 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 PEX10O60683 326 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 ZNF8P17098 575 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 HOXB9P17482 250 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 GDI2P50395 445 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 ACY1Q03154 408 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 CYP4F3Q08477 520 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 NIPAL4Q0D2K0 466 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 ST3GAL3Q11203 375 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 TMEM35AQ53FP2 167 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 SDR16C5Q8N3Y7 309 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 IPCEF1Q8WWN9 437 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 KLK6Q92876 244 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 NAT6Q93015 286 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 DGCR14Q96DF8 476 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 DERL2Q9GZP9 239 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 EBF3Q9H4W6 596 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 SMPD3Q9NY59 655 aaPredicted RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 EIF2B4Q9UI10 523 aaKnown RBP8.15□□□□□ -1.11
CHD8-213ENST00000557364 HS3ST4Q9Y661 456 aa8.15□□□□□ -1.11
CHD8-213ENST00000557364 LCHNA4D1U4 455 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 MMP20O60882 483 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 MAP3K8P41279 467 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 KCNC1P48547 511 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 PCDH1Q08174 1060 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 KLF10Q13118 480 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 UPP1Q16831 310 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 SLC36A3Q495N2 470 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 ABCA11PQ4W5N1 156 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 ARL13AQ5H913 290 aaPredicted RBP8.14□□□□□ -1.11
CHD8-213ENST00000557364 PRSS58Q8IYP2 241 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 CHST4Q8NCG5 386 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 CLHC1Q8NHS4 586 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 LPGAT1Q92604 370 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 ALG3Q92685 438 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 KCNC2Q96PR1 638 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 DEFB126Q9BYW3 111 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 NLGN3Q9NZ94 848 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 CSTBP04080 98 aaKnown RBP8.14□□□□□ -1.11
CHD8-213ENST00000557364 RLN2P04090 185 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 MECP2P51608 486 aaKnown RBP8.14□□□□□ -1.11
CHD8-213ENST00000557364 MZT1Q08AG7 82 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 FAM174BQ3ZCQ3 159 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 DDI2Q5TDH0 399 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 LRRC66Q68CR7 880 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 CCDC107Q8WV48 283 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
CHD8-213ENST00000557364 NXPE2Q96DL1 559 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 NEDD4LQ96PU5 975 aa8.14□□□□□ -1.11
CHD8-213ENST00000557364 GORASP1Q9BQQ3 440 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms