RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 STK26Q9P289 416 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 B3GAT1Q9P2W7 334 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 MUTYHQ9UIF7 546 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 DAPK2Q9UIK4 370 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 PPP2R2CQ9Y2T4 447 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 LAS1LQ9Y4W2 734 aaKnown RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 CROCCQ5TZA2 2017 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 WNK3Q9BYP7 1800 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 COL22A1Q8NFW1 1626 aaPredicted RBP3.44□□□□□ -1.86
VRK1-207ENST00000557352 NFAT5O94916 1531 aa3.44□□□□□ -1.86
VRK1-207ENST00000557352 N4BP2Q86UW6 1770 aaPredicted RBP3.43□□□□□ -1.86
VRK1-207ENST00000557352 LMO7Q8WWI1 1683 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 A0A087X0M5 115 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 A0A1B0GX30 115 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 A8MU10 97 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 OR10H2O60403 315 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 MED24O75448 989 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 PRKACGP22612 351 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 PPP2R1AP30153 589 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 GABRA5P31644 462 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 MAZP56270 477 aaKnown RBP3.43□□□□□ -1.86
VRK1-207ENST00000557352 CDK3Q00526 305 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 PAX8Q06710 450 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 PEX6Q13608 980 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 LY6DQ14210 128 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 SLC25A30Q5SVS4 291 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 TMEM207Q6UWW9 146 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 HAUS6Q7Z4H7 955 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 LDB1Q86U70 411 aaPredicted RBP3.43□□□□□ -1.86
VRK1-207ENST00000557352 AACSQ86V21 672 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 NPEPL1Q8NDH3 523 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 OR52N5Q8NH56 324 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 ZNF414Q96IQ9 312 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 C10orf90Q96M02 699 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 NEK1Q96PY6 1258 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 OR2B2Q9GZK3 357 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 SHARPINQ9H0F6 387 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 KRT84Q9NSB2 600 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 OR6C2Q9NZP2 312 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 MAN1B1Q9UKM7 699 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 PLAGL1Q9UM63 463 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 GRIP1Q9Y3R0 1128 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 SIPA1L3O60292 1781 aaPredicted RBP3.43□□□□□ -1.86
VRK1-207ENST00000557352 ZNF541Q9H0D2 1346 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 ADAMTS7Q9UKP4 1686 aa3.43□□□□□ -1.86
VRK1-207ENST00000557352 C1orf167Q5SNV9 1468 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 PKD1L3Q7Z443 1732 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 PARP4Q9UKK3 1724 aaKnown RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 RTL1A6NKG5 1358 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 LRRC37A3O60309 1634 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 AHDC1Q5TGY3 1603 aaPredicted RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 LTBP4Q8N2S1 1624 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 USO1O60763 962 aaKnown RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 IGHV3-13P01766 116 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 VPREB1P12018 145 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 ACSL1P33121 698 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 MFAP4P55083 255 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 SIRPAP78324 504 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 CYCSP99999 105 aaKnown RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 IRF3Q14653 427 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 MOGAT2Q3SYC2 334 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 SPDYCQ5MJ68 293 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 TMCO3Q6UWJ1 677 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 Q6ZR54 194 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 TMPRSS11FQ6ZWK6 438 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 RTN4RL2Q86UN3 420 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 CDK20Q8IZL9 346 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 GPRC5AQ8NFJ5 357 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 ARSGQ96EG1 525 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 ZNF486Q96H40 463 aaPredicted RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 CCDC34Q96HJ3 373 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 URM1Q9BTM9 101 aaKnown RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 SPATC1LQ9H0A9 340 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 SPHK1Q9NYA1 384 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 SEC63Q9UGP8 760 aaKnown RBP3.42□□□□□ -1.86
VRK1-207ENST00000557352 SCN11AQ9UI33 1791 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 NCAPD2Q15021 1401 aa3.42□□□□□ -1.86
VRK1-207ENST00000557352 NWD2Q9ULI1 1742 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 PXDNQ92626 1479 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 SBNO1A3KN83 1393 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 PLCH1Q4KWH8 1693 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 PI4KAP2A4QPH2 592 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 AVILO75366 819 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 ZWINTO95229 277 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 SEC24AO95486 1093 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 VTNP04004 478 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 PAX3P23760 479 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 HADHAP40939 763 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 RPL21P46778 160 aaKnown RBP3.41□□□□□ -1.86
VRK1-207ENST00000557352 ARSEP51690 589 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 LIMK2P53671 638 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 TMEM50BP56557 158 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 AIMP2Q13155 320 aaKnown RBP3.41□□□□□ -1.86
VRK1-207ENST00000557352 TNIP1Q15025 636 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 HERC3Q15034 1050 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 CCDC184Q52MB2 194 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 LYSMD4Q5XG99 296 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms