RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CAB39LQ9H9S4 337 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 TMEM184CQ9NVA4 438 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 IL17BQ9UHF5 180 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 OARD1Q9Y530 152 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 CCDC88CQ9P219 2028 aa11.97□□□□□ -0.49
SLIRP-209ENST00000557342 NPEPPSL1A6NEC2 478 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 C9J4A7 227 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CDC7O00311 574 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 TXNDC9O14530 226 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 PHGDHO43175 533 aaKnown RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CREG1O75629 220 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 FAM155BO75949 473 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ACSL3O95573 720 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 GUCA1CO95843 209 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ANXA5P08758 320 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CCDC166P0CW27 439 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 PIM1P11309 404 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 F8A1P23610 371 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 PTPN4P29074 926 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CRABP2P29373 138 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 HNMTP50135 292 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ATP6V0D1P61421 351 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 DCDP81605 110 aaKnown RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CDC20Q12834 499 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 PPP1R3AQ16821 1122 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 FBXO42Q6P3S6 717 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 MBOAT1Q6ZNC8 495 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ADCK2Q7Z695 626 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 C17orf64Q86WR6 236 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 OR56A3Q8NH54 315 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ANKRD49Q8WVL7 239 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 DHRS4Q9BTZ2 278 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 NLNQ9BYT8 704 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 AKIRIN1Q9H9L7 192 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 NFU1Q9UMS0 254 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 FARSAQ9Y285 508 aaKnown RBP11.96□□□□□ -0.49
SLIRP-209ENST00000557342 IKBKGQ9Y6K9 419 aa11.96□□□□□ -0.49
SLIRP-209ENST00000557342 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 LAMA5O15230 3695 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 A0A087WUV0 522 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 IGKV1-8A0A0C4DH67 115 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 H7BY64 318 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 NKX2-8O15522 239 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 INHBAP08476 426 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 GRK3P35626 688 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 SLC26A3P40879 764 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 EMP3P54852 163 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TSNQ15631 228 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 UAP1Q16222 522 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 PTCHD3Q3KNS1 767 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TAF1BQ53T94 588 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 FRMPD2BQ6IN97 320 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 C16orf46Q6P387 395 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TAOK1Q7L7X3 1001 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TBC1D1Q86TI0 1168 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 SYVN1Q86TM6 617 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TCAIMQ8N3R3 496 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 EIF1ADQ8N9N8 165 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 TTC9Q92623 222 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 THAP11Q96EK4 314 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 UBXN10Q96LJ8 280 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 PRAP1Q96NZ9 151 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 EGFL8Q99944 293 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 ACTL8Q9H568 366 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 CUTCQ9NTM9 273 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 PADI2Q9Y2J8 665 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 MRPS18BQ9Y676 258 aaKnown RBP11.95□□□□□ -0.5
SLIRP-209ENST00000557342 SEC16AO15027 2179 aa11.95□□□□□ -0.5
SLIRP-209ENST00000557342 A0A087X1B8 175 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 LOC102723532A0A0G2JNH3 316 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 A0A1B0GX78 115 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 HYKKA2RU49 373 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 H0YGG7 62 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 TK2O00142 265 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 DSCR3O14972 297 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ZZEF1O43149 2961 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 EIF2S1P05198 315 aaKnown RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CTSBP07858 339 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CD1DP15813 335 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 NPPBP16860 134 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ALAS2P22557 587 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms