RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SPTA1P02549 2419 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 CREBBPQ92793 2442 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 PTPRQQ9UMZ3 2332 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 MUC22E2RYF6 1773 aaPredicted RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 TRAV19A0A0A6YYK7 116 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 FAM47DPA6NHR8 397 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 E9PAM4 449 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 TMEM189-UBE2V1I3L0A0 370 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 CLGNO14967 610 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 KALRNO60229 2985 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 ZIC3O60481 467 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 GJB3O75712 270 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 PSMD10O75832 226 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 STBD1O95210 358 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 BAG4O95429 457 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 TDP2O95551 362 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 AFPP02771 609 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 F7P08709 466 aaPredicted RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 GABRG2P18507 467 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 GLRA2P23416 452 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 ABCD1P33897 745 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 CPOXP36551 454 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 FASLGP48023 281 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 TERF1P54274 439 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 C21orf59P57076 290 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 EEF1A1P68104 462 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 RNPS1Q15287 305 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 OASLQ15646 514 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 C6orf141Q5SZD1 244 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 ATF7IP2Q5U623 682 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 EEF1A1P5Q5VTE0 462 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 GGNBP1Q5YKI7 109 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 CENPPQ6IPU0 288 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 RHBDF2Q6PJF5 856 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 TRMT11Q7Z4G4 463 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 METTL23Q86XA0 190 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 THEM5Q8N1Q8 247 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 RDM1Q8NG50 284 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 SCFD1Q8WVM8 642 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 GTF3C6Q969F1 213 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 KLHL29Q96CT2 875 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 WBP1Q96G27 269 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 IL17FQ96PD4 163 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 PI4K2AQ9BTU6 479 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 ABCG4Q9H172 646 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 DHX33Q9H6R0 707 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 EBF2Q9HAK2 575 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 KIF9Q9HAQ2 790 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 C20orf141Q9NUB4 165 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 RRN3Q9NYV6 651 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 CISD1Q9NZ45 108 aaKnown RBP3.72□□□□□ -1.81
CHD8-212ENST00000557329 SIX4Q9UIU6 781 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 TMEM98Q9Y2Y6 226 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 SNX9Q9Y5X1 595 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 CYP46A1Q9Y6A2 500 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 COL4A2P08572 1712 aa3.72□□□□□ -1.81
CHD8-212ENST00000557329 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 hDV102S1A0JD36 115 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 MTMR11A4FU01 709 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TMEM202A6NGA9 273 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CCDC169A6NNP5 214 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 LAD1O00515 517 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 SH2B2O14492 632 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 KLK8O60259 260 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 SYNCRIPO60506 623 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 TACC1O75410 805 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 PMS2P2O95744 297 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CENPBP07199 599 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 ITGAXP20702 1163 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 RBMS1P29558 406 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 RPL9P32969 192 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 USP8P40818 1118 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 OPRD1P41143 372 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CXCR3P49682 368 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CLCNKAP51800 687 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CLDN2P57739 230 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 EEF1A2Q05639 463 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 PTP4A2Q12974 167 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 GPR17Q13304 367 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 DHX34Q14147 1143 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 NAB2Q15742 525 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 DCAF4L1Q3SXM0 396 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 ZC2HC1CQ53FD0 456 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 KCTD18Q6PI47 426 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 CD300LGQ6UXG3 332 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TUBA1AQ71U36 451 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TAOK1Q7L7X3 1001 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 CUZD1Q86UP6 607 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 PGBD5Q8N414 524 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 METTL27Q8N6F8 245 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 PLD5Q8N7P1 536 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 RBMXL3Q8N7X1 1067 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 ZNF713Q8N859 430 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 GANCQ8TET4 914 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 SCMH1Q96GD3 660 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TCEANC2Q96MN5 208 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 MTMR9Q96QG7 549 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms