RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ZC3H7AQ8IWR0 971 aaKnown RBP11.88□□□□□ -0.51
PSEN1-221ENST00000557293 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-221ENST00000557293 CFAP61Q8NHU2 1237 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 MIPEPQ99797 713 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
PSEN1-221ENST00000557293 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-221ENST00000557293 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 MROH6A6NGR9 719 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 H0YGG7 62 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 H7C0C1 242 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 OR56A5P0C7T3 313 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 SLC1A1P43005 524 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 ATP5OP48047 213 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 MARCKSL1P49006 195 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-221ENST00000557293 TCEAL1Q15170 157 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 UNC5DQ6UXZ4 953 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 DCUN1D3Q8IWE4 304 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 OR2L3Q8NG85 312 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 LILRB4Q8NHJ6 448 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 HMGCLL1Q8TB92 370 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF354BQ96LW1 612 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 HEMGNQ9BXL5 484 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 LIME1Q9H400 295 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 CCM2LQ9NUG4 571 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-221ENST00000557293 C14orf105Q9NVL8 296 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 ANKRD10Q9NXR5 420 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 FEZ2Q9UHY8 353 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-221ENST00000557293 PPT2Q9UMR5 302 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 CDC14AQ9UNH5 594 aa11.87□□□□□ -0.51
PSEN1-221ENST00000557293 INTS1Q8N201 2190 aaKnown RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 CCDC162PA2VCL2 907 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 NKX2-6A6NCS4 301 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 IQCF5A8MTL0 148 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 NEURL1O76050 574 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 SEC24DO94855 1032 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 SERPINC1P01008 464 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 UQCRHP07919 91 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 ABOP16442 354 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 HSPA14Q0VDF9 509 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 FOXD4Q12950 439 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 FASTKQ14296 549 aaKnown RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 OR1C1Q15619 314 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 SYTL3Q4VX76 610 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 LRRC8BQ6P9F7 803 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 CRLF3Q8IUI8 442 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 CYTH2Q99418 400 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 YIPF2Q9BWQ6 316 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 CARD6Q9BX69 1037 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 NAT10Q9H0A0 1025 aaKnown RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 GOLPH3Q9H4A6 298 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 MKKSQ9NPJ1 570 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 MKL2Q9ULH7 1088 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
PSEN1-221ENST00000557293 ALG6Q9Y672 507 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 ABCA4P78363 2273 aa11.86□□□□□ -0.51
PSEN1-221ENST00000557293 OR2W5A6NFC9 320 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 APOC4-APOC2K7ER74 178 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 MLYCDO95822 493 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 APOC2P02655 101 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 SP1P08047 785 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 MSNP26038 577 aaKnown RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 AOAHP28039 575 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 MSX1P28360 303 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 AP2B1P63010 937 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 POU6F1Q14863 301 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 ODF2Q5BJF6 829 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF468Q5VIY5 522 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 SLC25A25Q6KCM7 469 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 CEP128Q6ZU80 1094 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 CCDC50Q8IVM0 306 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 RHOT2Q8IXI1 618 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 ACTL9Q8TC94 416 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 HDAC10Q969S8 669 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 MMABQ96EY8 250 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 CABS1Q96KC9 395 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 OR2A5Q96R48 311 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 CHP1Q99653 195 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 DPH7Q9BTV6 452 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms