RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 DPY30Q9C005 99 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
APEX1-216ENST00000557159 KRT84Q9NSB2 600 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 OLA1Q9NTK5 396 aaKnown RBP12.21□□□□□ -0.45
APEX1-216ENST00000557159 ACOXLQ9NUZ1 547 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
APEX1-216ENST00000557159 RPS6KA6Q9UK32 745 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 AGO1Q9UL18 857 aaKnown RBP12.21□□□□□ -0.45
APEX1-216ENST00000557159 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.45
APEX1-216ENST00000557159 U3KQV3 271 aa12.21□□□□□ -0.45
APEX1-216ENST00000557159 RANBP2P49792 3224 aaKnown RBP12.21□□□□□ -0.46
APEX1-216ENST00000557159 CCL22O00626 93 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ARHGAP33O14559 1287 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ENPP3O14638 875 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 SEC14L5O43304 696 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 TRIM3O75382 744 aaPredicted RBP12.21□□□□□ -0.46
APEX1-216ENST00000557159 CYP2A7P20853 494 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 HTR6P50406 440 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ZNF140P52738 457 aaPredicted RBP12.21□□□□□ -0.46
APEX1-216ENST00000557159 ITGA1P56199 1179 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 IL2P60568 153 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 PCDH1Q08174 1060 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 SYT16Q17RD7 645 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 INO80DQ53TQ3 878 aaPredicted RBP12.21□□□□□ -0.46
APEX1-216ENST00000557159 PRSS36Q5K4E3 855 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 TIGD3Q6B0B8 471 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ZNF367Q7RTV3 350 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 NOXA1Q86UR1 476 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ZSWIM9Q86XI8 627 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 C7orf61Q8IZ16 206 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 ZNF683Q8IZ20 524 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 KCNJ9Q92806 393 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 PHOX2BQ99453 314 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 EPYCQ99645 322 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 GPR21Q99679 349 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 RHNO1Q9BSD3 238 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 DYRK4Q9NR20 520 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 CD274Q9NZQ7 290 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 SPASTQ9UBP0 616 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 EVLQ9UI08 416 aaPredicted RBP12.21□□□□□ -0.46
APEX1-216ENST00000557159 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 HS3ST4Q9Y661 456 aa12.21□□□□□ -0.46
APEX1-216ENST00000557159 A8MVJ9 347 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 OR7A17O14581 309 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 NBNO60934 754 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 POMCP01189 267 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 FABP3P05413 133 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 PKMP14618 531 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 RGS6P49758 472 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 CCL23P55773 120 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 CREMQ03060 361 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 ABRQ12979 859 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 CAMK2GQ13555 558 aaPredicted RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 BCL7AQ4VC05 210 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 SPANXN4Q5MJ08 99 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 PIK3R6Q5UE93 754 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 IL31Q6EBC2 164 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 GCNT7Q6ZNI0 430 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 GDPGP1Q6ZNW5 385 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 ZNF598Q86UK7 904 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 RNF130Q86XS8 419 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 DENND6BQ8NEG7 585 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 OR4F6Q8NGB9 312 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 ZNF675Q8TD23 568 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 JPH3Q8WXH2 748 aaPredicted RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 ITCHQ96J02 903 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 PKMYT1Q99640 499 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 DHRS9Q9BPW9 319 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 ARPC5LQ9BPX5 153 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 RTP3Q9BQQ7 232 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 TBCDQ9BTW9 1192 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 POLR1EQ9GZS1 481 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 SP110Q9HB58 689 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 SERHLQ9NQF3 203 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 TRMT6Q9UJA5 497 aaKnown RBP12.2□□□□□ -0.46
APEX1-216ENST00000557159 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 ARL5AQ9Y689 179 aa12.2□□□□□ -0.46
APEX1-216ENST00000557159 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 NDUFS3O75489 264 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 C9P02748 559 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 CYP4B1P13584 511 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 SLC2A4P14672 509 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 PTPN6P29350 595 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 ERP29P30040 261 aaKnown RBP12.19□□□□□ -0.46
APEX1-216ENST00000557159 GGT2P36268 569 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 GNPDA1P46926 289 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 ITKQ08881 620 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 FCHO2Q0JRZ9 810 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 GTF2H2Q13888 395 aa12.19□□□□□ -0.46
APEX1-216ENST00000557159 ABRAXAS2Q15018 415 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms