RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PGLS	O95336	258 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	LCA5L	O95447	670 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	HEXA	P06865	529 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	UMOD	P07911	640 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM153B	P0C7A2	387 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CYP11B1	P15538	503 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PFKFB1	P16118	471 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF7	P17097	686 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF8	P17098	575 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CYP2A7	P20853	494 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	TNFAIP3	P21580	790 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	BMP5	P22003	454 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	IDS	P22304	550 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	MMP11	P24347	488 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	MST1	P26927	711 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	SDC4	P31431	198 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	HSPA9	P38646	679 aa	Known RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	FOLR3	P41439	243 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PTPN9	P43378	593 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	SYK	P43405	635 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	TNFSF10	P50591	281 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	STC1	P52823	247 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	AIF1	P55008	147 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	DCD	P81605	110 aa	Known RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	IRF9	Q00978	393 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ROM1	Q03395	351 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	IL10RB	Q08334	325 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	MFAP5	Q13361	173 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PTPRR	Q15256	657 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	C3AR1	Q16581	482 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PTCHD3	Q3KNS1	767 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ARMC12	Q5T9G4	340 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	IRAK1BP1	Q5VVH5	260 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	LRRC66	Q68CR7	880 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CLEC9A	Q6UXN8	241 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076		Q71RC1	249 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	B4GALNT4	Q76KP1	1039 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PPP1R32	Q7Z5V6	425 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CAMKMT	Q7Z624	323 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PYROXD2	Q8N2H3	581 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CCDC185	Q8N715	623 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ANKRD53	Q8N9V6	530 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	OR1L3	Q8NH93	324 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	THAP3	Q8WTV1	239 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CA5BP1	Q8WTZ4	195 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PHF10	Q8WUB8	498 aa	Known RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	RXFP2	Q8WXD0	754 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF599	Q96NL3	588 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	NUDCD1	Q96RS6	583 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	WDR24	Q96S15	920 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	GPHA2	Q96T91	129 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	SMR3A	Q99954	134 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF559	Q9BR84	538 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	AP1M1	Q9BXS5	423 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	OSGEPL1	Q9H4B0	414 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM83D	Q9H4H8	585 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	FANCE	Q9HB96	536 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	NOD2	Q9HC29	1040 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	PLCB1	Q9NQ66	1216 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	FANCL	Q9NW38	375 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	GPATCH2L	Q9NWQ4	482 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	HRASLS2	Q9NWW9	162 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ATXN10	Q9UBB4	475 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CD84	Q9UIB8	345 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	CFAP45	Q9UL16	551 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	DNPEP	Q9ULA0	475 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	AP1M2	Q9Y6Q5	423 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZAN	Q9Y493	2812 aa		4.53	□□□□□ -1.68
SCFD1-223	ENST00000557076	NCOA6	Q14686	2063 aa	Predicted RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076		A0A0J9YYE9	177 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	FAM237A	A0A1B0GTK4	181 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	OR5K3	A6NET4	321 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	C2CD4B	A6NLJ0	364 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	OR52A4P	A6NMU1	304 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	PDZK1P1	A8MUH7	402 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	TMEM150C	B9EJG8	249 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076		E7EQ34	232 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076		E9PLN8	166 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	GOLGA8S	H3BPF8	625 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	PROM1	O43490	865 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	PRAMEF2	O60811	474 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	MFAP3L	O75121	409 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	PMPCB	O75439	489 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	CTAG2	O75638	210 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	SLC25A14	O95258	325 aa	Predicted RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	RASAL1	O95294	804 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	CLDN7	O95471	211 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	LSM8	O95777	96 aa	Known RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	GNA14	O95837	355 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	PRL	P01236	227 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	TRBC1	P01850	177 aa		4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	HOXD4	P09016	255 aa	Predicted RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	UNG	P13051	313 aa	Predicted RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	FBL	P22087	321 aa	Known RBP	4.52	□□□□□ -1.69
SCFD1-223	ENST00000557076	UGT1A4	P22310	534 aa		4.52	□□□□□ -1.69

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