RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 FAM199XQ6PEV8 388 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-207ENST00000556831 BORAQ6PGQ7 559 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 CYS1Q717R9 158 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 NOA1Q8NC60 698 aaKnown RBP13.52□□□□□ -0.25
SLIRP-207ENST00000556831 FBF1Q8TES7 1133 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 TTC9Q92623 222 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 RUFY1Q96T51 708 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 RBBP8Q99708 897 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 SPRTNQ9H040 489 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-207ENST00000556831 CHST8Q9H2A9 424 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 ACTL8Q9H568 366 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 PCMTD2Q9NV79 361 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 STOX2Q9P2F5 926 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-207ENST00000556831 IL17BQ9UHF5 180 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 PDE10AQ9Y233 779 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 PCDHGA6Q9Y5G7 932 aa13.52□□□□□ -0.25
SLIRP-207ENST00000556831 MRPS18BQ9Y676 258 aaKnown RBP13.52□□□□□ -0.25
SLIRP-207ENST00000556831 A0A0J9YVX5 310 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 A0A1W2PPV9 198 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CDC14CA4D256 554 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 FAM159BA6NKW6 160 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 NKX2-8O15522 239 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CTIFO43310 598 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 PRICKLE3O43900 615 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CREG1O75629 220 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 GUCA1CO95843 209 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 EZRP15311 586 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 ALAS2P22557 587 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 HRH2P25021 359 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 GRK3P35626 688 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CCR10P46092 362 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 VSX2P58304 361 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 TAS2R39P59534 338 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 DCDP81605 110 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 ERV3-1Q14264 604 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 TRADDQ15628 312 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 FAM214AQ32MH5 1076 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 ATP1A1-AS1Q5TC04 95 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CAPN13Q6MZZ7 669 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 RHBDD2Q6NTF9 364 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 AGTRAPQ6RW13 159 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 ADAMTSL2Q86TH1 951 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 SYVN1Q86TM6 617 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 C17orf64Q86WR6 236 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 EXTL1Q92935 676 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 WBP1Q96G27 269 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 EGFL8Q99944 293 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 NLNQ9BYT8 704 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 LRRC4CQ9HCJ2 640 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 IFT80Q9P2H3 777 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 CTNNAL1Q9UBT7 734 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 POLHQ9Y253 713 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 FARSAQ9Y285 508 aaKnown RBP13.51□□□□□ -0.25
SLIRP-207ENST00000556831 KLK4Q9Y5K2 254 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 IKBKGQ9Y6K9 419 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 BOD1L1Q8NFC6 3051 aa13.51□□□□□ -0.25
SLIRP-207ENST00000556831 A0A1B0GX78 115 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 NPEPPSL1A6NEC2 478 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 PIAS1O75925 651 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 RAB40ALP0C0E4 278 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 SFTPCP11686 197 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 RORAP35398 523 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 GABRA4P48169 554 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 PGGT1BP53609 377 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 GPX6P59796 221 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 LY6DQ14210 128 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 ZNF460Q14592 562 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 NCF4Q15080 339 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 PHKG1Q16816 387 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 DEFB109BQ30KR1 87 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 MLIPQ5VWP3 458 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 TTLL10Q6ZVT0 673 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 RNF44Q7L0R7 432 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 IFT20Q8IY31 132 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 TBC1D19Q8N5T2 526 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 ENDOVQ8N8Q3 282 aaKnown RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 SLC38A9Q8NBW4 561 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 ANKRD7Q92527 254 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 PDLIM5Q96HC4 596 aaKnown RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 CABS1Q96KC9 395 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 CYTH2Q99418 400 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 PLCD4Q9BRC7 762 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 HAUS8Q9BT25 410 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 ATG10Q9H0Y0 220 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 SLC6A20Q9NP91 592 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 SMYD2Q9NRG4 433 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms