RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 VPS26AO75436 327 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CEACAM4O75871 244 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TSPAN12O95859 305 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 MYBL2P10244 700 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CMPK1P30085 196 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 PGGT1BP53609 377 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 DCDP81605 110 aaKnown RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CBLBQ13191 982 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 FRG1Q14331 258 aaKnown RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TCTE1Q5JU00 501 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ICE2Q659A1 982 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ZNF425Q6IV72 752 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TCTN3Q6NUS6 607 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ATG14Q6ZNE5 492 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TTLL10Q6ZVT0 673 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 OR4N4Q8N0Y3 316 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 PDIK1LQ8N165 341 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 OR2Y1Q8NGV0 311 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 FBXO25Q8TCJ0 367 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 SMPDL3AQ92484 453 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 FKBP10Q96AY3 582 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 LRRC39Q96DD0 335 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CFAP36Q96G28 342 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 C10orf90Q96M02 699 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 C17orf62Q9BQA9 187 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 SELENOSQ9BQE4 189 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 PLCD4Q9BRC7 762 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 DPH7Q9BTV6 452 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 MLXIPLQ9NP71 852 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CUTCQ9NTM9 273 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TXLNGQ9NUQ3 528 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 IRAK4Q9NWZ3 460 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 GRHL1Q9NZI5 618 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 IFT80Q9P2H3 777 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ANKMY1Q9P2S6 941 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 ZC3H7BQ9UGR2 993 aaKnown RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TAC3Q9UHF0 121 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 TRMT6Q9UJA5 497 aaKnown RBP9.88□□□□□ -0.83
SHMT2-224ENST00000556737 PADI2Q9Y2J8 665 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 PSAT1Q9Y617 370 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 MYO18BQ8IUG5 2567 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 HEATR5BQ9P2D3 2071 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 CCDC88CQ9P219 2028 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 A0A0J9YVX5 310 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 FDXRP22570 491 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 RPA3P35244 121 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 HSD17B2P37059 387 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 CASRP41180 1078 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 FOLR3P41439 243 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ARSFP54793 590 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ARL4CP56559 192 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 VSX2P58304 361 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 TBPL1P62380 186 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 SP140Q13342 867 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 GRM7Q14831 915 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 NAA25Q14CX7 972 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PHKG1Q16816 387 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PRTGQ2VWP7 1150 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 COLEC12Q5KU26 742 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 YOD1Q5VVQ6 348 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 MLIPQ5VWP3 458 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PAQR3Q6TCH7 311 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 MBOAT1Q6ZNC8 495 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 CEP128Q6ZU80 1094 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 UBE2R2Q712K3 238 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PPP1R32Q7Z5V6 425 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 RAB43Q86YS6 212 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ARHGEF39Q8N4T4 335 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 EEF1AKMT1Q8WVE0 214 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 LINGO1Q96FE5 620 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 SPSB2Q99619 263 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 OLFM1Q99784 485 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ZFYVE21Q9BQ24 234 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 MCMBPQ9BTE3 642 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 FAM129AQ9BZQ8 928 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ING2Q9H160 280 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 SLC26A1Q9H2B4 701 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 MRPS30Q9NP92 439 aaKnown RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 TAS2R13Q9NYV9 303 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 STOX2Q9P2F5 926 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 CTSFQ9UBX1 484 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 NDOR1Q9UHB4 597 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ANAPC2Q9UJX6 822 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PTRH2Q9Y3E5 179 aaKnown RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 PCDHGA9Q9Y5G4 932 aaKnown RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 SEC16AO15027 2179 aa9.87□□□□□ -0.83
SHMT2-224ENST00000556737 ASH1LQ9NR48 2969 aaKnown RBP9.87□□□□□ -0.83
SHMT2-224ENST00000556737 MDC1Q14676 2089 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ZNF839A8K0R7 811 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 H0YGG7 62 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 HAT1O14929 419 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 P2RX6O15547 441 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 SRPX2O60687 465 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 CCNDBP1O95273 360 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 SYF2O95926 243 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 FAM153BP0C7A2 387 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms