RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OR2A25A4D2G3 310 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 NPEPPSL1A6NEC2 478 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 TMEM150CB9EJG8 249 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 NRP2O60462 931 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 KIAA0754O94854 1291 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SLU7O95391 586 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 SYF2O95926 243 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 ALDOAP04075 364 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 NTRK1P04629 796 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 CCDC166P0CW27 439 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 CD1DP15813 335 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 NPPBP16860 134 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 STMN1P16949 149 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 WT1P19544 449 aaPredicted RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 SLC26A3P40879 764 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 MAGEA12P43365 314 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 KCNC1P48547 511 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SLC12A2P55011 1212 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ABATP80404 500 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 CDKL1Q00532 357 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 RELAQ04206 551 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 NAE1Q13564 534 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 BMPR2Q13873 1038 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 TSNQ15631 228 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 MROH9Q5TGP6 573 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ICE2Q659A1 982 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 CYB5D1Q6P9G0 228 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ZNF517Q6ZMY9 492 aaPredicted RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 LRRC69Q6ZNQ3 347 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 PAQR7Q86WK9 346 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 GSPT2Q8IYD1 628 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 SYTL1Q8IYJ3 562 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SPATA6LQ8N4H0 392 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 UHMK1Q8TAS1 419 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 DCAKDQ8WVC6 231 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SNRNP27Q8WVK2 155 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 HNRNPLLQ8WVV9 542 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.26□□□□□ -0.93
SRP54-210ENST00000556380 FBXL8Q96CD0 374 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 MRRFQ96E11 262 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 RNF31Q96EP0 1072 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 LRFN5Q96NI6 719 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 PLCD4Q9BRC7 762 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 DPH7Q9BTV6 452 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ACAT2Q9BWD1 397 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 ULBP3Q9BZM4 244 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SPRTNQ9H040 489 aaPredicted RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 PCBD2Q9H0N5 130 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SYNPO2LQ9H987 977 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 IGSF5Q9NSI5 407 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 INTS7Q9NVH2 962 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 ARL15Q9NXU5 204 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 EURLQ9NYK6 297 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 CTNNAL1Q9UBT7 734 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 SERTAD3Q9UJW9 196 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 PLCL2Q9UPR0 1127 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 OARD1Q9Y530 152 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 TLN1Q9Y490 2541 aaKnown RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 LOC101059948A0A1B0GTJ6 334 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 SCRG1O75711 98 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 C2P06681 752 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 HIST1H2AGP0C0S8 130 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 HIST1H2ADP20671 130 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 F8A1P23610 371 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CMPK1P30085 196 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 RPA3P35244 121 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 RORAP35398 523 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 STAT5AP42229 794 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ITGA1P56199 1179 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ATP6V0D1P61421 351 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 TBPL1P62380 186 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 VSNL1P62760 191 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ABHD18Q0P651 414 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 SLC29A2Q14542 456 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 OR4D1Q15615 310 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 DEFB110Q30KQ9 67 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CDKL4Q5MAI5 379 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 C19orf48Q6RUI8 117 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 C6orf15Q6UXA7 325 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 RNF44Q7L0R7 432 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ADAMTSL2Q86TH1 951 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ISCA2Q86U28 154 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 VASH2Q86V25 355 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 KLHDC8AQ8IYD2 350 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CACNA2D3Q8IZS8 1091 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CENPLQ8N0S6 344 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 NLGN4XQ8N0W4 816 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ESX1Q8N693 406 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 GALNT6Q8NCL4 622 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 NLGN4YQ8NFZ3 816 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 KIAA1191Q96A73 305 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 PTERQ96BW5 349 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CRELD1Q96HD1 420 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 HIST1H2AHQ96KK5 128 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 GPR78Q96P69 363 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms