RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ACAT2Q9BWD1 397 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 NLNQ9BYT8 704 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 MRPS30Q9NP92 439 aaKnown RBP11.06□□□□□ -0.64
SLIRP-205ENST00000556310 CCDC177Q9NQR7 707 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-205ENST00000556310 SMYD2Q9NRG4 433 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 TXLNGQ9NUQ3 528 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 STOX2Q9P2F5 926 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-205ENST00000556310 ADAMTS6Q9UKP5 1117 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 PDE10AQ9Y233 779 aa11.06□□□□□ -0.64
SLIRP-205ENST00000556310 IGKV1-8A0A0C4DH67 115 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PABPN1LA6NDY0 278 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 FAM159BA6NKW6 160 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 NRP2O60462 931 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 C1QAP02745 245 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 CAPN1P07384 714 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 AGXTP21549 392 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 MAGEA4P43358 317 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 CCR10P46092 362 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PGGT1BP53609 377 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ARSFP54793 590 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 AP1S2P56377 157 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 GPX6P59796 221 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 RPS18P62269 152 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 TBPL1P62380 186 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 YBX1P67809 324 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ABATP80404 500 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PRDX1Q06830 199 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 LY6DQ14210 128 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 GRM7Q14831 915 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PHKG1Q16816 387 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 YOD1Q5VVQ6 348 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ZNF425Q6IV72 752 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 LCN10Q6JVE6 187 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PAQR7Q86WK9 346 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ENDOVQ8N8Q3 282 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 MED8Q96G25 268 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PDLIM5Q96HC4 596 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 CPNE1Q99829 537 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ZFYVE21Q9BQ24 234 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PLCD4Q9BRC7 762 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 FAM129AQ9BZQ8 928 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 POPDC3Q9HBV1 291 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ZDHHC18Q9NUE0 388 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 UTP6Q9NYH9 597 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 TXNDC16Q9P2K2 825 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 DHCR7Q9UBM7 475 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 POLHQ9Y253 713 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 FARSAQ9Y285 508 aaKnown RBP11.05□□□□□ -0.64
SLIRP-205ENST00000556310 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
SLIRP-205ENST00000556310 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 NUP210LQ5VU65 1888 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 BSNQ9UPA5 3926 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 A0A0J9YVX5 310 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 A0A1B0GX78 115 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CDC14CA4D256 554 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CTAGE15A4D2H0 777 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 FITM1A5D6W6 292 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CXorf49A8MYA2 514 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 PIAS1O75925 651 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 C1QL1O75973 258 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 PRB1P04280 392 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 ENO2P09104 434 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 FURINP09958 794 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 HIST1H2AGP0C0S8 130 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CTAGE8P0CG41 777 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 EZRP15311 586 aaKnown RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 HIST1H2ADP20671 130 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 SAT1P21673 171 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CCND1P24385 295 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 STX2P32856 288 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 GP5P40197 560 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 POLE2P56282 527 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 TAS2R39P59534 338 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 DCDP81605 110 aaKnown RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 GUCY2DQ02846 1103 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 IL10RAQ13651 578 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 ERV3-1Q14264 604 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 UGT8Q16880 541 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 DEFB109BQ30KR1 87 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 THEMIS2Q5TEJ8 643 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 C1orf189Q5VU69 101 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 PRAMEF13Q5VWM6 474 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 FRMPD2BQ6IN97 320 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 AGTRAPQ6RW13 159 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 TMEM207Q6UWW9 146 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 MBOAT1Q6ZNC8 495 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 C3orf62Q6ZUJ4 267 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CTAGE6Q86UF2 777 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CTAGE4Q8IX94 777 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 NKAPQ8N5F7 415 aaKnown RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 EXD3Q8N9H8 876 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 TTC29Q8NA56 475 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 NOA1Q8NC60 698 aaKnown RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 APOBEC4Q8WW27 367 aaKnown RBP11.04□□□□□ -0.64
SLIRP-205ENST00000556310 ANKRD7Q92527 254 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms