RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GPR63Q9BZJ6 419 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 SLC26A1Q9H2B4 701 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 GANQ9H2C0 597 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 TFB2MQ9H5Q4 396 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 WDR54Q9H977 334 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 SEPT11Q9NVA2 429 aaKnown RBP6.55□□□□□ -1.36
ATXN3-236ENST00000556220 PARVAQ9NVD7 372 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 PTGFRNQ9P2B2 879 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 KCNN3Q9UGI6 736 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
ATXN3-236ENST00000556220 HIVEP2P31629 2446 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 KLHL33A6NCF5 533 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TMEM191CA6NGB0 347 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 OR2AG2A6NM03 316 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 C2orf74A8MZ97 194 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 E9PLN8 166 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PES1O00541 588 aaKnown RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A9O60656 530 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 F10P00742 488 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 SLC4A1P02730 911 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 HLA-DQB2P05538 268 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PIRTP0C851 137 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PRR35P0CG20 571 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A6P19224 532 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ITGAXP20702 1163 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PTMSP20962 102 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A1P22309 533 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 FDXRP22570 491 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CCNCP24863 283 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PBLDP30039 288 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PCK1P35558 622 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CD86P42081 329 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 POLR2FP61218 127 aaKnown RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TMPRSS15P98073 1019 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CLCQ05315 142 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 GALNT2Q10471 571 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 SYCP1Q15431 976 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CEBPEQ15744 281 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TPD52L1Q16890 204 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 DEFB110Q30KQ9 67 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 LDLRAP1Q5SW96 308 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CCDC122Q5T0U0 273 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 SPESP1Q6UW49 350 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 HOOK3Q86VS8 718 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ADGRF3Q8IZF5 1079 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 DNAJC22Q8N4W6 341 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 C19orf47Q8N9M1 422 aaKnown RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 OR2L2Q8NH16 312 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 SUN3Q8TAQ9 357 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 AGAP11Q8TF27 550 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 RMDN2Q96LZ7 410 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 GPR137Q96N19 417 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 NAP1L5Q96NT1 182 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TSGA13Q96PP4 275 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TRIB3Q96RU7 358 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 DMRTA2Q96SC8 542 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 NRTNQ99748 197 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 AGPAT1Q99943 283 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PLCD4Q9BRC7 762 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 TRIM7Q9C029 511 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 CNTD2Q9H8S5 307 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A7Q9HAW7 530 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A10Q9HAW8 530 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 UGT1A8Q9HAW9 530 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF160Q9HCG1 818 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 BPIFA1Q9NP55 256 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 IL26Q9NPH9 171 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 NLRC4Q9NPP4 1024 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 SAMSN1Q9NSI8 373 aaKnown RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ACTR10Q9NZ32 417 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 COQ3Q9NZJ6 369 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ST6GALNAC2Q9UJ37 374 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 NXT1Q9UKK6 140 aaKnown RBP6.54□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF711Q9Y462 761 aa6.54□□□□□ -1.36
ATXN3-236ENST00000556220 A0A1B0GX78 115 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 VSTM2BA6NLU5 285 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 ADAM10O14672 748 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 AURKAO14965 403 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SLCO2B1O94956 709 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 ZWINTO95229 277 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 BMP10O95393 424 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 MLYCDO95822 493 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 MT-CYBP00156 380 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SERPINA7P05543 415 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 POLBP06746 335 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 HOXD4P09016 255 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SLC35G4P0C7Q5 338 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PYGMP11217 842 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PI3P19957 117 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DNASE1P24855 282 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 BUD31P41223 144 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 CARSP49589 748 aaKnown RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 KLK7P49862 253 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 MEOX1P50221 254 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 ARSFP54793 590 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PMP22Q01453 160 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms