RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OR2T5Q6IEZ7 315 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 C22orf39Q6P5X5 142 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 LINGO4Q6UY18 593 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 OR2T29Q8NH02 315 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 RHEBL1Q8TAI7 183 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 TFGQ92734 400 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 OSTF1Q92882 214 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 RFT1Q96AA3 541 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM125Q96AQ2 219 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 AURKBQ96GD4 344 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 MYOCQ99972 504 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ETAA1Q9NY74 926 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 COL20A1Q9P218 1284 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 MKLN1Q9UL63 735 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 POMPQ9Y244 141 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 MAGED1Q9Y5V3 778 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 BACE2Q9Y5Z0 518 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 DNM1LO00429 736 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SLC31A1O15431 190 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CLPXO76031 633 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 S100A6P06703 90 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 HBQ1P09105 142 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 DLDP09622 509 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 XKP51811 444 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ASTE1Q2TB18 679 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PLEKHN1Q494U1 663 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 EMC10Q5UCC4 262 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SPATA6LQ8N4H0 392 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF781Q8N8C0 355 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 OR9A1PQ8NGU1 263 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CLHC1Q8NHS4 586 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 HS6ST2Q96MM7 605 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 MND1Q9BWT6 205 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 KCNH6Q9H252 994 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF446Q9NWS9 450 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 RIMKLBQ9ULI2 386 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CNOT6Q9ULM6 557 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PLEKHA6Q9Y2H5 1048 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 NOX1Q9Y5S8 564 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM14AQ9Y6G1 99 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 COL14A1Q05707 1796 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 C10orf71Q711Q0 1435 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 A0A1B0GVC2 190 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 A0A1W2PP18 115 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CCNKO75909 580 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 FARS2O95363 451 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 LINGO3P0C6S8 592 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PRKCHP24723 683 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 STC1P52823 247 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SLC18A2Q05940 514 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 TARDBPQ13148 414 aaKnown RBP eCLIP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 NFE2L1Q14494 772 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 NCBP2-AS2Q69YL0 99 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 GRHL2Q6ISB3 625 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 TMIGD1Q6UXZ0 262 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 AHSA2Q719I0 299 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 GID4Q8IVV7 300 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 OR4K17Q8NGC6 315 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SLC5A11Q8WWX8 675 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 EXOSC1Q9Y3B2 195 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 INSL5Q9Y5Q6 135 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 COL2A1P02458 1487 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CLEC3AO75596 197 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 VNN1O95497 513 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PLGP00747 810 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 GP1BBP13224 206 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ERP29P30040 261 aaKnown RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 NUMBP49757 651 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CD47Q08722 323 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 UBXN2BQ14CS0 331 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SGCBQ16585 318 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 PLA2G4EQ3MJ16 856 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 ENPP7Q6UWV6 458 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CHRDL2Q6WN34 429 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 CDCA3Q99618 268 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 SLC22A4Q9H015 551 aa10.45□□□□□ -0.74
ACTN1-216ENST00000556083 NLE1Q9NVX2 485 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-216ENST00000556083 MT-CYBP00156 380 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 AOC1P19801 751 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 MATN1P21941 496 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PROZP22891 400 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ACTC1P68032 377 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ACTA1P68133 377 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 BLMHQ13867 455 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 KCNJ11Q14654 390 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM35AQ53FP2 167 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 MS4A13Q5J8X5 152 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 MOB2Q70IA6 237 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF676Q8N7Q3 588 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 POLR2J2Q9GZM3 115 aaKnown RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 TIGARQ9NQ88 270 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ST14Q9Y5Y6 855 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CAPN8A6NHC0 703 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 OR1I1O60431 355 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms