RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 NEK10Q6ZWH5 1172 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CENPUQ71F23 418 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 ST6GALNAC3Q8NDV1 305 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 MIEF2Q96C03 454 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 CABS1Q96KC9 395 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 PLCD4Q9BRC7 762 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 MRPS30Q9NP92 439 aaKnown RBP18.81■□□□□ 0.6
PRKCH-219ENST00000555906 SAMD15Q9P1V8 674 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 SLC5A6Q9Y289 635 aa18.81■□□□□ 0.6
PRKCH-219ENST00000555906 SVILO95425 2214 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 IGKV1-8A0A0C4DH67 115 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 A1L4Q6 167 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF839A8K0R7 811 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 H0YGG7 62 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 AVILO75366 819 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 EIF2S1P05198 315 aaKnown RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 HSD17B2P37059 387 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 VPS41P49754 854 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 CLCN7P51798 805 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 ARF3P61204 181 aaPredicted RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 Q0VFX4 171 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 DSG2Q14126 1118 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF169Q14929 603 aaPredicted RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 TRIP13Q15645 432 aaPredicted RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF470Q6ECI4 717 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 NEPROQ6NW34 567 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 CASC4Q6P4E1 433 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 SUSD1Q6UWL2 747 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 PAQR7Q86WK9 346 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 PARP9Q8IXQ6 854 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 FBXO15Q8NCQ5 510 aaPredicted RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 THOC3Q96J01 351 aaKnown RBP18.8■□□□□ 0.6
PRKCH-219ENST00000555906 C5orf34Q96MH7 638 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 C14orf105Q9NVL8 296 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 KLHL42Q9P2K6 505 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 GALPQ9UBC7 116 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 C3orf18Q9UK00 162 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 CDC14AQ9UNH5 594 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 ITPR2Q14571 2701 aa18.8■□□□□ 0.6
PRKCH-219ENST00000555906 FAM237BA0A1B0GVD1 139 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 A0A1W2PQ72 361 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 E2F3O00716 465 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 USP1O94782 785 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 MLNP12872 115 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 EZRP15311 586 aaKnown RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 CXCR5P32302 372 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 PNLIPRP1P54315 467 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 GPS1Q13098 491 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 MFAP5Q13361 173 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 DHX34Q14147 1143 aaKnown RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ANKRD22Q5VYY1 191 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ICE2Q659A1 982 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF425Q6IV72 752 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 FBXO42Q6P3S6 717 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ISLR2Q6UXK2 745 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 MAMDC2Q7Z304 686 aaPredicted RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 CAND1Q86VP6 1230 aaKnown RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 CSNK1A1LQ8N752 337 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 GIMAP7Q8NHV1 300 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 KCNJ9Q92806 393 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF669Q96BR6 464 aaPredicted RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 MESP1Q9BRJ9 268 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 TRIM56Q9BRZ2 755 aaKnown RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ZNF160Q9HCG1 818 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 UTP6Q9NYH9 597 aaKnown RBP18.79■□□□□ 0.6
PRKCH-219ENST00000555906 TAC3Q9UHF0 121 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 ZGRF1Q86YA3 2104 aa18.79■□□□□ 0.6
PRKCH-219ENST00000555906 DIDO1Q9BTC0 2240 aaKnown RBP18.78■□□□□ 0.6
PRKCH-219ENST00000555906 COX6A1P12074 109 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 FDXRP22570 491 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 TERF1P54274 439 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 RELAQ04206 551 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 PRDX1Q06830 199 aaKnown RBP18.78■□□□□ 0.6
PRKCH-219ENST00000555906 TLR1Q15399 786 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 KCTD19Q17RG1 926 aaPredicted RBP18.78■□□□□ 0.6
PRKCH-219ENST00000555906 GARNL3Q5VVW2 1013 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 ATG9BQ674R7 924 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 CRYBG3Q68DQ2 2970 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 TTC27Q6P3X3 843 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 REXO1L1PQ8IX06 675 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 PRSS58Q8IYP2 241 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 DNAJB14Q8TBM8 379 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 CNDP1Q96KN2 507 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 PKP4Q99569 1192 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 SYNPO2LQ9H987 977 aa18.78■□□□□ 0.6
PRKCH-219ENST00000555906 XAB2Q9HCS7 855 aaKnown RBP18.78■□□□□ 0.6
PRKCH-219ENST00000555906 RUVBL1Q9Y265 456 aaKnown RBP18.78■□□□□ 0.6
PRKCH-219ENST00000555906 MYO9AB2RTY4 2548 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 PCDH17O14917 1159 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 SLC16A8O95907 504 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 KRT14P02533 472 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 MPC1LP0DKB6 136 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 ENO3P13929 434 aaPredicted RBP18.77■□□□□ 0.6
PRKCH-219ENST00000555906 ABATP80404 500 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 CDC16Q13042 620 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 TSTA3Q13630 321 aaPredicted RBP18.77■□□□□ 0.6
PRKCH-219ENST00000555906 HKDC1Q2TB90 917 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 VWA2Q5GFL6 755 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 KCNMB4Q86W47 210 aa18.77■□□□□ 0.6
PRKCH-219ENST00000555906 KBTBD2Q8IY47 623 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms