RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
PCNX4-209ENST00000555569 ATP13A2Q9NQ11 1180 aa13.19□□□□□ -0.3
PCNX4-209ENST00000555569 UTP6Q9NYH9 597 aaKnown RBP13.19□□□□□ -0.3
PCNX4-209ENST00000555569 CTSFQ9UBX1 484 aa13.19□□□□□ -0.3
PCNX4-209ENST00000555569 CDC23Q9UJX2 597 aa13.19□□□□□ -0.3
PCNX4-209ENST00000555569 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
PCNX4-209ENST00000555569 SPENQ96T58 3664 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 VSTM2BA6NLU5 285 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 E7ENX8 843 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 H0YGG7 62 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 MASP2O00187 686 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 SMAPO00193 183 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 EIF3FO00303 357 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 BANF1O75531 89 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 TTC4O95801 387 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 ALPPP05187 535 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 ARF3P61204 181 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 TAP2Q03519 686 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 AIMP2Q13155 320 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 MUM1Q2TAK8 710 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 PRTGQ2VWP7 1150 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 MSS51Q4VC12 460 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 ZNF425Q6IV72 752 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 UGT3A1Q6NUS8 523 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 UBE2R2Q712K3 238 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 COL26A1Q96A83 441 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 C10orf90Q96M02 699 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 SLAMF7Q9NQ25 335 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 ABCF3Q9NUQ8 709 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 STOX2Q9P2F5 926 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 TRMT6Q9UJA5 497 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 FBXL4Q9UKA2 621 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 MAP4K5Q9Y4K4 846 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 HS3ST3B1Q9Y662 390 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
PCNX4-209ENST00000555569 RELNP78509 3460 aa13.18□□□□□ -0.3
PCNX4-209ENST00000555569 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 USP27XA6NNY8 438 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SOCS6O14544 535 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 VPS4BO75351 444 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 IVDP26440 423 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 RGS4P49798 205 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 EMP3P54852 163 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SOX8P57073 446 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 ABATP80404 500 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 OCA2Q04671 838 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 RBBP7Q16576 425 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 LRRC8EQ6NSJ5 796 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SHISA6Q6ZSJ9 500 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 LRRC56Q8IYG6 542 aaPredicted RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 Q8NA96 180 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 GALNT11Q8NCW6 608 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 PNPLA2Q96AD5 504 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 NDNQ99608 321 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 SEMA3GQ9NS98 782 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 TAS2R13Q9NYV9 303 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 VPS4AQ9UN37 437 aa13.17□□□□□ -0.3
PCNX4-209ENST00000555569 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
PCNX4-209ENST00000555569 EZRP15311 586 aaKnown RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 FBLP22087 321 aaKnown RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 ITGA3P26006 1051 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 GABRB3P28472 473 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 IMPA1P29218 277 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 GNG11P61952 73 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 TIAL1Q01085 375 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 RELAQ04206 551 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 INPP5JQ15735 1006 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 PRAMEF13Q5VWM6 474 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 KIRREL2Q6UWL6 708 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 KIAA0408Q6ZU52 694 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 ADCK2Q7Z695 626 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 IGDCC3Q8IVU1 814 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 CNTN4Q8IWV2 1026 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 KLHL7Q8IXQ5 586 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 STT3BQ8TCJ2 826 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 MCOLN3Q8TDD5 553 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms