RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ERAL1O75616 437 aaKnown RBP2.77□□□□□ -1.97
SNX6-204ENST00000555541 PRKAR1AP10644 381 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 SOX3P41225 446 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 MTHFRP42898 656 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 MAPK12P53778 367 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 ITGA7Q13683 1181 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 SNAPC1Q16533 368 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 PHKG1Q16816 387 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 MCMDC2Q4G0Z9 681 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 FAM205BPQ63HN1 556 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 PRR27Q6MZM9 219 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 MFSD12Q6NUT3 480 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 FAM198BQ6UWH4 519 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 ZFAND4Q86XD8 727 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 SLC34A3Q8N130 599 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 PRPF31Q8WWY3 499 aaKnown RBP2.77□□□□□ -1.97
SNX6-204ENST00000555541 SKA1Q96BD8 255 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 NXNL1Q96CM4 212 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 TMCO6Q96DC7 493 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 CNRIP1Q96F85 164 aaPredicted RBP2.77□□□□□ -1.97
SNX6-204ENST00000555541 PDLIM5Q96HC4 596 aaKnown RBP2.77□□□□□ -1.97
SNX6-204ENST00000555541 CYYR1Q96J86 154 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 LGMNQ99538 433 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 CCDC3Q9BQI4 270 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 TDRD1Q9BXT4 1180 aaKnown RBP2.77□□□□□ -1.97
SNX6-204ENST00000555541 NYXQ9GZU5 481 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 MYNNQ9NPC7 610 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 GDE1Q9NZC3 331 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 CLIP2Q9UDT6 1046 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 TBC1D29Q9UFV1 150 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 GON4LQ3T8J9 2241 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 TRBV5-5A0A0J9YX44 114 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 GLOD5A6NK44 160 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 IPO8O15397 1037 aaKnown RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 HOXD4P09016 255 aaPredicted RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 RAB40ALP0C0E4 278 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 PFKFB1P16118 471 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 PIK3R1P27986 724 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 PDHA2P29803 388 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 DNA2P51530 1060 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 ZNF75DP51815 510 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 NAP1L1P55209 391 aaKnown RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 MYL7Q01449 175 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 ZFP36L1Q07352 338 aaKnown RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 WTAPQ15007 396 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 DMKNQ6E0U4 476 aaPredicted RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 ZER1Q7Z7L7 766 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 NDUFAF2Q8N183 169 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 TDRD5Q8NAT2 981 aaKnown RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 APPL2Q8NEU8 664 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 OR7A2PQ8NGA2 310 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 OR4K1Q8NGD4 311 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 OR5T2Q8NGG2 359 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 OR10Q1Q8NGQ4 319 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 CFAP61Q8NHU2 1237 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 ATL1Q8WXF7 558 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 CALML4Q96GE6 196 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 C2orf48Q96LS8 159 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 MAP3K3Q99759 626 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 ZMYND12Q9H0C1 365 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 PARLQ9H300 379 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 Q9H8V8 135 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 BLOC1S4Q9NUP1 217 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 PRMT7Q9NVM4 692 aaPredicted RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 ADD3Q9UEY8 706 aaKnown RBP2.76□□□□□ -1.97
SNX6-204ENST00000555541 VPS28Q9UK41 221 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 CELA1Q9UNI1 258 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 WDR83OSQ9Y284 106 aa2.76□□□□□ -1.97
SNX6-204ENST00000555541 IGHV4-30-2A0A087WSY4 118 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 hCG_1807616A0A1W2PRN6 198 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 ATP1B1P05026 303 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 LINGO3P0C6S8 592 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 IRF2P14316 349 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 ALOX12P18054 663 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 ETV5P41161 510 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 OR3A2P47893 321 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 ZFP36L2P47974 494 aaKnown RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 VAMP7P51809 220 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 CD300CQ08708 224 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 TMEM132DQ14C87 1099 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 PTPN14Q15678 1187 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 GPR33Q49SQ1 333 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 LCLAT1Q6UWP7 414 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 FAM131BQ86XD5 332 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 TAGAPQ8N103 731 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 KLHDC1Q8N7A1 406 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 C9orf43Q8TAL5 461 aaPredicted RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 NPRL2Q8WTW4 380 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 TOMM40LQ969M1 308 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 RSRC1Q96IZ7 334 aaKnown RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 FAM71F1Q96KD3 344 aaPredicted RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 C1orf147Q96MC9 270 aaPredicted RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 BARD1Q99728 777 aaKnown RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 ZNF577Q9BSK1 485 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 GOLPH3LQ9H4A5 285 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 TUBB1Q9H4B7 451 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 MTHFD2LQ9H903 347 aaPredicted RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.75□□□□□ -1.97
SNX6-204ENST00000555541 THAP10Q9P2Z0 257 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms