RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 COQ8BQ96D53 544 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 TRMT61AQ96FX7 289 aaKnown RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 PPM1MQ96MI6 270 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 ATP13A1Q9HD20 1204 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 TMLHEQ9NVH6 421 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 NDRG4Q9ULP0 352 aaKnown RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 NOSIPQ9Y314 301 aaKnown RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF175Q9Y473 711 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 FAM25EA8MYX2 175 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 KIAA0513O60268 411 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TNFRSF21O75509 655 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 PPM1BO75688 479 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 ALAS2P22557 587 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 AZGP1P25311 298 aaKnown RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 COL19A1Q14993 1142 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF79Q15937 498 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 SLC35F1Q5T1Q4 408 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 SHQ1Q6PI26 577 aaKnown RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TMPRSS11AQ6ZMR5 421 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 C16orf62Q7Z3J2 963 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 COMMD7Q86VX2 200 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 PHC2Q8IXK0 858 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 RYBPQ8N488 228 aaPredicted RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 AKAP1Q92667 903 aaKnown RBP eCLIP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 HYLS1Q96M11 299 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 C11orf54Q9H0W9 315 aaPredicted RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 GMEB2Q9UKD1 530 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 KCTD3Q9Y597 815 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 FAM234BA2RU67 622 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF623O75123 536 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 PEX11BO96011 259 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 CD86P42081 329 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 GPR19Q15760 415 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TIGD5Q53EQ6 642 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TMEM81Q6P7N7 255 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TEX261Q6UWH6 196 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 DLEU7Q6UYE1 221 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 GPAT4Q86UL3 456 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 C9orf62Q8N4C0 152 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 PTGR2Q8N8N7 351 aaPredicted RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 CDYL2Q8N8U2 506 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 NSUN5Q96P11 429 aaKnown RBP15.22■□□□□ 0.03
SYNE3-203ENST00000554873 KCNA7Q96RP8 456 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 GABARAPL1Q9H0R8 117 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 NT5MQ9NPB1 228 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 KLK4Q9Y5K2 254 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 CSNK1G3Q9Y6M4 447 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 U3KQ87 197 aa15.22■□□□□ 0.03
SYNE3-203ENST00000554873 SLC7A4O43246 635 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 WBP4O75554 376 aaKnown RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 CD1DP15813 335 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 PCSK1P29120 753 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 CCR1P32246 355 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 NFKB2Q00653 900 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ITKQ08881 620 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 KCNC3Q14003 757 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 TTC29Q8NA56 475 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 OR2T12Q8NG77 320 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF675Q8TD23 568 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 LPPQ93052 612 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 AP2M1Q96CW1 435 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 IMP4Q96G21 291 aaKnown RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF583Q96ND8 569 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 TBCDQ9BTW9 1192 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 BRINP2Q9C0B6 783 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 TTC3P53804 2025 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 A0A096LPI6 279 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MROH6A6NGR9 719 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ACSL4O60488 711 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF254O75437 659 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MOCS2O96007 188 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 THP07101 528 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF37AP17032 561 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 C21orf33P30042 268 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 BRCC3P46736 316 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 RGS6P49758 472 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 TIAL1Q01085 375 aaKnown RBP eCLIP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MAB21L1Q13394 359 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 TATDN3Q17R31 274 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 CPA6Q8N4T0 437 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 RTL3Q8N8U3 475 aaKnown RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ZNF680Q8NEM1 530 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 USB1Q9BQ65 265 aaKnown RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MFSD1Q9H3U5 465 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MAGIXQ9H6Y5 334 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 RGS18Q9NS28 235 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ABCB8Q9NUT2 735 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 OSER1Q9NX31 292 aa15.21■□□□□ 0.03
SYNE3-203ENST00000554873 MRPL39Q9NYK5 338 aaKnown RBP15.21■□□□□ 0.03
SYNE3-203ENST00000554873 ANKRD12Q6UB98 2062 aa15.21■□□□□ 0.02
SYNE3-203ENST00000554873 E9PAM4 449 aa15.21■□□□□ 0.02
SYNE3-203ENST00000554873 CSF2P04141 144 aa15.21■□□□□ 0.02
SYNE3-203ENST00000554873 PRR35P0CG20 571 aa15.21■□□□□ 0.02
SYNE3-203ENST00000554873 RPS3P23396 243 aaKnown RBP eCLIP15.21■□□□□ 0.02
SYNE3-203ENST00000554873 PFKFB4Q16877 469 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms