RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TMEM173Q86WV6 379 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ERO1BQ86YB8 467 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 PAPD5Q8NDF8 572 aaKnown RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 EXD1Q8NHP7 514 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 SECTM1Q8WVN6 248 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TEKT4Q8WW24 435 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ARNTL2Q8WYA1 636 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 SMPDL3BQ92485 455 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 SECISBP2LQ93073 1101 aaKnown RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF653Q96CK0 615 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 RMDN1Q96DB5 314 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 OXNAD1Q96HP4 312 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF582Q96NG8 517 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MS4A10Q96PG2 267 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 C16orf70Q9BSU1 422 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 POLR3CQ9BUI4 534 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 GPR88Q9GZN0 384 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 OPA3Q9H6K4 179 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TRPC7Q9HCX4 862 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 EQTNQ9NQ60 294 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MBNL1Q9NR56 388 aaKnown RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 OLAHQ9NV23 265 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MIOSQ9NXC5 875 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 NPAP1Q9NZP6 1156 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 C5AR2Q9P296 337 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 WDR35Q9P2L0 1181 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 RHCGQ9UBD6 479 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 GIMAP2Q9UG22 337 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 IL17BQ9UHF5 180 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 OSGIN1Q9UJX0 560 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ZHX1Q9UKY1 873 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 CCL27Q9Y4X3 112 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 ZHX2Q9Y6X8 837 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 NBEAQ8NFP9 2946 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 MYO3BQ8WXR4 1341 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 NOTCH2Q04721 2471 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 COL1A1P02452 1464 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 TET1Q8NFU7 2136 aa1.44□□□□□ -2.18
PRPF39-208ENST00000554785 IBTKQ9P2D0 1353 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-208ENST00000554785 PTPRSQ13332 1948 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 A0A0B4J293 547 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 A0A0G2JNG1 304 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 EDDM13A0A1B0GTR0 161 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PRSS51A0A1B0GVH4 220 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1W2PS18 150 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ELOVL7A1L3X0 281 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CTAGE9A4FU28 777 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ANKUB1A6NFN9 424 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 C5orf60A6NFR6 353 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 URADA6NGE7 173 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 EPOPA6NHQ4 379 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 A8MXE2 369 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PRAC2D3DTV9 90 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SYNGR3O43761 229 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF500O60304 480 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 EIF5BO60841 1220 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TADA2AO75478 443 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GCNT3O95395 438 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PGK1P00558 417 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LIPFP07098 398 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CA3P07451 260 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SNRNP70P08621 437 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CTAGE8P0CG41 777 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MCCP23508 829 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MC5RP33032 325 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MMP15P51511 669 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF75DP51815 510 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF132P52740 706 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CSE1LP55060 971 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KRTAP10-5P60370 271 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RPL24P83731 157 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ILF3Q12906 894 aaKnown RBP eCLIP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RALGDSQ12967 914 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 HSPB3Q12988 150 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KIR2DS5Q14953 304 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PSMD6Q15008 389 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TAF7Q15545 349 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DUOXA1Q1HG43 343 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SHROOM1Q2M3G4 852 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF718Q3SXZ3 478 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC152Q4G0S7 254 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ASPRV1Q53RT3 343 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FAM133BQ5BKY9 247 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 STXBP5Q5T5C0 1151 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RNASEH2BQ5TBB1 312 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NDUFAF5Q5TEU4 345 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CST9LP1Q5W188 147 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KLC3Q6P597 504 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PACS1Q6VY07 963 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MEX3BQ6ZN04 569 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF771Q7L3S4 317 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CHST3Q7LGC8 479 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 EXOC3L1Q86VI1 746 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 IQCHQ86VS3 1027 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LONP2Q86WA8 852 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PTOV1Q86YD1 416 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CTAGE4Q8IX94 777 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF595Q8IYB9 648 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NAGSQ8N159 534 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms