RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 LRRC6Q86X45 466 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 OR2Y1Q8NGV0 311 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 PROKR1Q8TCW9 393 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SLC44A1Q8WWI5 657 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CDKL2Q92772 493 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 PEX13Q92968 403 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 HDAC10Q969S8 669 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SNRNP40Q96DI7 357 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CFAP36Q96G28 342 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 KIFC1Q9BW19 673 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SLC7A5P2Q9GIP4 190 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 ZNF552Q9H707 407 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CNOT10Q9H9A5 744 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SYBUQ9NX95 663 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 MOCS1Q9NZB8 636 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 OR6C2Q9NZP2 312 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CIDEBQ9UHD4 219 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 RIMKLBQ9ULI2 386 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 NTNG1Q9Y2I2 539 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 PADI2Q9Y2J8 665 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 FAM169AQ9Y6X4 670 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 POLEQ07864 2286 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 A1L4Q6 167 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 KRT87PA6NCN2 255 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 IQCF5A8MTL0 148 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 ISM1B1AKI9 464 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MAP3K7O43318 606 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 ALOX12BO75342 701 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 FAM155BO75949 473 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MAGP20916 626 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 ADRA1DP25100 572 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CNTFP26441 200 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 GCAP28676 217 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 FOLR3P41439 243 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MSH2P43246 934 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MAGOHP61326 146 aaKnown RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 PPP2R2AP63151 447 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 DCDP81605 110 aaKnown RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 ACVR1Q04771 509 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 GABPB1Q06547 395 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SSPNQ14714 243 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CRYMQ14894 314 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MYBPC3Q14896 1274 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SLC5A12Q1EHB4 618 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 KBTBD12Q3ZCT8 623 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 NKAIN1Q4KMZ8 207 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SYTL3Q4VX76 610 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 HP1BP3Q5SSJ5 553 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 TSTD2Q5T7W7 516 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CASC4Q6P4E1 433 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 COX15Q7KZN9 410 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SLC26A11Q86WA9 606 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 HPS6Q86YV9 775 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SLC22A15Q8IZD6 547 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MPP5Q8N3R9 675 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 GALNT16Q8N428 558 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 DTWD1Q8N5C7 304 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 C2orf73Q8N5S3 287 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 PPHLN1Q8NEY8 458 aaKnown RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 GABPB2Q8TAK5 448 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 N4BP2L2Q92802 583 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SGSM3Q96HU1 749 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 IL17FQ96PD4 163 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 PAFAH2Q99487 392 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CENPHQ9H3R5 247 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 PLAC1Q9HBJ0 212 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SLAMF7Q9NQ25 335 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 ASF1BQ9NVP2 202 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 P4HTMQ9NXG6 502 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 NSMCE4AQ9NXX6 385 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 PSD3Q9NYI0 1048 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 C5AR2Q9P296 337 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MARCH4Q9P2E8 410 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 IFT80Q9P2H3 777 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 POLG2Q9UHN1 485 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 NOVA2Q9UNW9 492 aaKnown RBP10.15□□□□□ -0.78
SHMT2-215ENST00000554656 SRPK3Q9UPE1 567 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CSAG2Q9Y5P2 127 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 AP1M2Q9Y6Q5 423 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 MYO9AB2RTY4 2548 aa10.15□□□□□ -0.78
SHMT2-215ENST00000554656 HEATR5BQ9P2D3 2071 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 SVILO95425 2214 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 DIDO1Q9BTC0 2240 aaKnown RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 IQANK1A0A1B0GTG1 560 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 HEATR9A2RTY3 570 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 POC1B-GALNT4F8VUJ3 575 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 QSOX1O00391 747 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 GPC4O75487 556 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 MED26O95402 600 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 INHBAP08476 426 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 OR56A5P0C7T3 313 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 SLC18A1P54219 525 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 MGAT5Q09328 741 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 KIR2DS3Q14952 304 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 NR6A1Q15406 480 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms