RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 LPGAT1Q92604 370 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GLYATL1Q969I3 302 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ULK4Q96C45 1275 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 COX14Q96I36 57 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 BMFQ96LC9 184 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ZIM3Q96PE6 472 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 VPS35Q96QK1 796 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 CYTH2Q99418 400 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TMEM109Q9BVC6 243 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TEX101Q9BY14 249 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 NELFAQ9H3P2 528 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 FBXO6Q9NRD1 293 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ZSCAN32Q9NX65 697 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 PLA2G3Q9NZ20 509 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 VPS18Q9P253 973 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 NCDNQ9UBB6 729 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ST6GALNAC2Q9UJ37 374 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 CRLS1Q9UJA2 301 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 DMTF1Q9Y222 760 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 HS3ST3A1Q9Y663 406 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GPR179Q6PRD1 2367 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TP53BP1Q12888 1972 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 CABIN1Q9Y6J0 2220 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 LRP4O75096 1905 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ZFC3H1O60293 1989 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 EXOC1LA0A1B0GW35 172 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 A0A1W2PR77 199 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 FAM171A2A8MVW0 826 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PRAMEF26H0Y7S4 382 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 AGPSO00116 658 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 MAP2K7O14733 419 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SGTAO43765 313 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 NDUFS3O75489 264 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 HAUS5O94927 633 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SLC25A14O95258 325 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PYGLP06737 847 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 HOXC4P09017 264 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ALOX15P16050 662 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CD27P26842 260 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 NUDT1P36639 197 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 GP5P40197 560 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PTGER3P43115 390 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 LEPRP48357 1165 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 TTPAP49638 278 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CSE1LP55060 971 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PFN3P60673 137 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CDK3Q00526 305 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF844Q08AG5 666 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ITIH4Q14624 930 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 GRM7Q14831 915 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PLK5Q496M5 336 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 AARS2Q5JTZ9 985 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 LDLRAP1Q5SW96 308 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 TPRG1LQ5T0D9 272 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 GRTP1Q5TC63 336 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 LYPLAL1Q5VWZ2 237 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PMS2CLQ68D20 193 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ANKS6Q68DC2 871 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 FAM111BQ6SJ93 734 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 LRIG3Q6UXM1 1119 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 KYAT3Q6YP21 454 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CERS6Q6ZMG9 384 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 LPCAT2Q7L5N7 544 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ABI3BPQ7Z7G0 1075 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ADGRG6Q86SQ4 1221 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ZC3HC1Q86WB0 502 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 TDRPQ86YL5 185 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ZBTB44Q8NCP5 570 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 DDHD1Q8NEL9 900 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ACVR1CQ8NER5 493 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 DNASE2BQ8WZ79 361 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SNX19Q92543 992 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CDKL2Q92772 493 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ZBTB9Q96C00 473 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 HIC2Q96JB3 615 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SERAC1Q96JX3 654 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 MRGPRX4Q96LA9 322 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 BIRC8Q96P09 236 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 OR14A2Q96R54 314 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PAFAH2Q99487 392 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 COPS8Q99627 209 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CPNE1Q99829 537 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CCDC77Q9BR77 488 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 APOOQ9BUR5 198 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 P2RY12Q9H244 342 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 RHOJQ9H4E5 214 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 WDR26Q9H7D7 661 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 INTS10Q9NVR2 710 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 EURLQ9NYK6 297 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CTNNAL1Q9UBT7 734 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 FETUBQ9UGM5 382 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 EIF2B4Q9UI10 523 aaKnown RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 SLC24A2Q9UI40 661 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 CRYL1Q9Y2S2 319 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 OR1A2Q9Y585 309 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms