RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TRPV3Q8NET8 790 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF461Q8TAF7 563 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 RHEBL1Q8TAI7 183 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CSGALNACT1Q8TDX6 532 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 DQX1Q8TE96 717 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CHPT1Q8WUD6 406 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SMARCD2Q92925 531 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FAM149B1Q96BN6 582 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ELMO2Q96JJ3 720 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 UROC1Q96N76 676 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GPR78Q96P69 363 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FOXB1Q99853 325 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 MRPL45Q9BRJ2 306 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 PAAF1Q9BRP4 392 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GPATCH1Q9BRR8 931 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 WDR12Q9GZL7 423 aaKnown RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 WDR55Q9H6Y2 383 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 C8orf33Q9H7E9 229 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 GPN2Q9H9Y4 310 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ARNT2Q9HBZ2 717 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 FAM49BQ9NUQ9 324 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SLC38A7Q9NVC3 462 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ATAD3AQ9NVI7 634 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ARHGEF38Q9NXL2 777 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CACNG4Q9UBN1 327 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF639Q9UID6 485 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 MAGEL2Q9UJ55 1249 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 CDC42EP3Q9UKI2 254 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 MAGED2Q9UNF1 606 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-203ENST00000554264 RNF11Q9Y3C5 154 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 TCAF1Q9Y4C2 921 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 SCN1AP35498 2009 aa5.79□□□□□ -1.48
VPS33B-203ENST00000554264 WDR87Q6ZQQ6 2873 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CFAP47Q6ZTR5 3102 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PRORSD1PA6NEY8 169 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SYCE1LA8MT33 242 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 KCNU1A8MYU2 1149 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PRRG1O14668 218 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PTGESO14684 152 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PFDN6O15212 129 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 MATN3O15232 486 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CLOCKO15516 846 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 GMNNO75496 209 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 EPN2O95208 641 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 KCNK5O95279 499 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 FKBP9O95302 570 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 LDLRP01130 860 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 AHSGP02765 367 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PDGFRBP09619 1106 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SBK3P0C264 359 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 BPIP17213 487 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 LBPP18428 481 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CCNA2P20248 432 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 HTR1EP28566 365 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 HOXC13P31276 330 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ARCN1P48444 511 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SERPINB10P48595 397 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CXCR3P49682 368 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CCT8P50990 548 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 KPNA1P52294 538 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 DAOAP59103 153 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 HERVK_113P63132 956 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 OCA2Q04671 838 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ADIGQ0VDE8 80 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CBX3Q13185 183 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SRSF5Q13243 272 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C16orf72Q14CZ0 275 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SF3A2Q15428 464 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 NRF1Q16656 503 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SMU1Q2TAY7 513 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CCDC92Q53HC0 331 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C6orf10Q5SRN2 563 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 STPG1Q5TH74 334 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TTC23Q5W5X9 447 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PM20D1Q6GTS8 502 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SLC8B1Q6J4K2 584 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 NEPROQ6NW34 567 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C16orf87Q6PH81 154 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 VITQ6UXI7 678 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 USP51Q70EK9 711 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CDR2LQ86X02 465 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 MFSD6LQ8IWD5 586 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TCEAL8Q8IYN2 117 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 DCP1BQ8IZD4 617 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF786Q8N393 782 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SVOPLQ8N434 492 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ATPAF2Q8N5M1 289 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C12orf29Q8N999 325 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 OR52E4Q8NGH9 312 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SLC2A14Q8TDB8 520 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 KCTD4Q8WVF5 259 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 LRTOMTQ8WZ04 291 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 USP13Q92995 863 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ABTB1Q969K4 478 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 EFHD2Q96C19 240 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C12orf43Q96C57 262 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SDCCAG3Q96C92 435 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 C19orf60Q96EN9 201 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms