RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ARL16Q0P5N6 197 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 PTPRCAPQ14761 206 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 FAM133BQ5BKY9 247 aaKnown RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 FAM76BQ5HYJ3 339 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 MDH1BQ5I0G3 518 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 RUSC1-AS1Q66K80 236 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 CHST3Q7LGC8 479 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 NFE4Q86UQ8 179 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 Q8NFD4 153 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 DMBX1Q8NFW5 382 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 RNF128Q8TEB7 428 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF473Q8WTR7 871 aaKnown RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 MRPS27Q92552 414 aaKnown RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 SCRN2Q96FV2 425 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 LRRCC1Q9C099 1032 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 VN1R1Q9GZP7 353 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 TCF7L2Q9NQB0 619 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 KCNG2Q9UJ96 466 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 PA2G4Q9UQ80 394 aaKnown RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 EXOC6BQ9Y2D4 811 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 GREB1LQ9C091 1923 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 ANKRD31Q8N7Z5 1873 aa4.83□□□□□ -1.64
FOXN3-206ENST00000554005 TNRC6CQ9HCJ0 1690 aaKnown RBP4.83□□□□□ -1.64
FOXN3-206ENST00000554005 BICDL2A1A5D9 508 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 TSPY2A6NKD2 308 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 PRR32B1ATL7 298 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 KRT36O76013 467 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 CCDC175P0C221 793 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 TSPY3P0CV98 308 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 TSPY8P0CW00 308 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 SKILP12757 684 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 MSH3P20585 1137 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 PCGF2P35227 344 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 SLC9A3P48764 834 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF41P51814 821 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 RPS8P62241 208 aaKnown RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 RPS18P62269 152 aaKnown RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 TSPY1Q01534 308 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 IFT88Q13099 833 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 COG2Q14746 738 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 HSP90B2PQ58FF3 399 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ANO5Q75V66 913 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 CCDC186Q7Z3E2 898 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 SLFN11Q7Z7L1 901 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 SMIM29Q86T20 159 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 GRAPLQ8TC17 118 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ATL1Q8WXF7 558 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ALG14Q96F25 216 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ST6GAL2Q96JF0 529 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ZMAT2Q96NC0 199 aaKnown RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 SEPHS2Q99611 448 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 NAA11Q9BSU3 229 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 NUP85Q9BW27 656 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 RSPH9Q9H1X1 276 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-206ENST00000554005 PELI2Q9HAT8 420 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 MED4Q9NPJ6 270 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 OLFML3Q9NRN5 406 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 TAAR2Q9P1P5 351 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 MYH3P11055 1940 aa4.82□□□□□ -1.64
FOXN3-206ENST00000554005 MROH5Q6ZUA9 1318 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 RAD50Q92878 1312 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 SMCHD1A6NHR9 2005 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 PES1O00541 588 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 BBOX1O75936 387 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 WDPCPO95876 746 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ATP1A1P05023 1023 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 TPM3P06753 285 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 RAB40ALP0C0E4 278 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ALDH1B1P30837 517 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 PSMD6Q15008 389 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ACCSLQ4AC99 568 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 CTR9Q6PD62 1173 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 GDPD4Q6W3E5 623 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 COMMD2Q86X83 199 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 MAML2Q8IZL2 1156 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ARHGAP24Q8N264 748 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 TTC30BQ8N4P2 665 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 MNS1Q8NEH6 495 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 SFXN2Q96NB2 322 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 AGAP3Q96P47 875 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 FAM129AQ9BZQ8 928 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ARRDC1-AS1Q9H2J1 176 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 TFB2MQ9H5Q4 396 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 UPF2Q9HAU5 1272 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 Q9N2K0 584 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 MYNNQ9NPC7 610 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 CGNQ9P2M7 1197 aaKnown RBP4.81□□□□□ -1.64
FOXN3-206ENST00000554005 PADI2Q9Y2J8 665 aa4.81□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF609O15014 1411 aa4.8□□□□□ -1.64
FOXN3-206ENST00000554005 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
FOXN3-206ENST00000554005 A0A1W2PPQ1 181 aa4.8□□□□□ -1.64
FOXN3-206ENST00000554005 A0A1W2PRB8 838 aa4.8□□□□□ -1.64
FOXN3-206ENST00000554005 EME2A4GXA9 379 aaPredicted RBP4.8□□□□□ -1.64
FOXN3-206ENST00000554005 PTGESO14684 152 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms