RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF678Q5SXM1 525 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 FCRL6Q6DN72 434 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 GTF2H2CQ6P1K8 395 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 FIGLAQ6QHK4 219 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 GALNT15Q8N3T1 639 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 CHCHD4Q8N4Q1 142 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 TEX9Q8N6V9 391 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 ANKRD42Q8N9B4 389 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 C19orf47Q8N9M1 422 aaKnown RBP11.77□□□□□ -0.53
SHMT2-209ENST00000553949 ABHD11Q8NFV4 315 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 ZUFSPQ96AP4 578 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 L3HYPDHQ96EM0 354 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 TCTN2Q96GX1 697 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 SLC41A2Q96JW4 573 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 PRAP1Q96NZ9 151 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 SELENOSQ9BQE4 189 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 C1QTNF3Q9BXJ4 246 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 CAPS2Q9BXY5 557 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-209ENST00000553949 SOHLH2Q9NX45 425 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 ANKMY1Q9P2S6 941 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 PCTPQ9UKL6 214 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 SNX7Q9UNH6 387 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 BTRCQ9Y297 605 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 ANGPTL3Q9Y5C1 460 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 DCHS1Q96JQ0 3298 aa11.77□□□□□ -0.53
SHMT2-209ENST00000553949 FAM149AA5PLN7 773 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 E7EQ34 232 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 AGRPO00253 132 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 MAP3K7O43318 606 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 SUPT7LO94864 414 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 BPGMP07738 259 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 DHRS4L1P0CG22 281 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 HRH2P25021 359 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 ALDH3A1P30838 453 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHMT2-209ENST00000553949 SERPINB4P48594 390 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 CCR8P51685 355 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 UNC50Q53HI1 259 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 CATSPEREQ5SY80 951 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 LIPMQ5VYY2 423 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 ZNF425Q6IV72 752 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 NXPE4Q6UWF7 544 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 SLCO4C1Q6ZQN7 724 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 GOLGA7Q7Z5G4 137 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 TMPRSS11BQ86T26 416 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 PAQR7Q86WK9 346 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 D2HGDHQ8N465 521 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 PPP4R1Q8TF05 950 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 ZNF483Q8TF39 744 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-209ENST00000553949 MOCOSQ96EN8 888 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
SHMT2-209ENST00000553949 MECRQ9BV79 373 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 CHRNA10Q9GZZ6 450 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 FAM60AQ9NP50 221 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 PDE7BQ9NP56 450 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 MLXIPLQ9NP71 852 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 ACSS2Q9NR19 701 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 TMEM184CQ9NVA4 438 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
SHMT2-209ENST00000553949 AKAP7Q9P0M2 348 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-209ENST00000553949 OR2A25A4D2G3 310 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 CLGNO14967 610 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 BIRC5O15392 142 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 NRP2O60462 931 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 TRIM13O60858 407 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 KATNA1O75449 491 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 EBLN1P0CF75 366 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 VARSP26640 1264 aaKnown RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 NAGLUP54802 743 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 CDH13P55290 713 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 CSNK1G2P78368 415 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 ASPHQ12797 758 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 GPS2Q13227 327 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 KCNAB1Q14722 419 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 TMTC4Q5T4D3 741 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 HHATQ5VTY9 493 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 ATG9BQ674R7 924 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 RPS27LQ71UM5 84 aaKnown RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 MARCH9Q86YJ5 346 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 CCNYL1Q8N7R7 359 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 OR4K1Q8NGD4 311 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 LIN37Q96GY3 246 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 CMKLR1Q99788 373 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 EHD1Q9H4M9 534 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 NOL11Q9H8H0 719 aaKnown RBP11.75□□□□□ -0.53
SHMT2-209ENST00000553949 IPPKQ9H8X2 491 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 PELI2Q9HAT8 420 aa11.75□□□□□ -0.53
SHMT2-209ENST00000553949 ZBTB26Q9HCK0 441 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms