RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 SLC1A2P43004 574 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 ARF3P61204 181 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 PRDX1Q06830 199 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 CUL1Q13616 776 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 TSTA3Q13630 321 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 TUBB8Q3ZCM7 444 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 ICE2Q659A1 982 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 ZNF549Q6P9A3 640 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 Q6ZS92 163 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 PAQR7Q86WK9 346 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 AGGF1Q8N302 714 aaeCLIP16.73■□□□□ 0.272e-17■□□□□ 8.1
SDR39U1-206ENST00000553930 NAT8LQ8N9F0 302 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 OR11G2Q8NGC1 345 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 STT3BQ8TCJ2 826 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 CALML6Q8TD86 181 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 GRK7Q8WTQ7 553 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 ASB11Q8WXH4 323 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 MIEF2Q96C03 454 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 CABS1Q96KC9 395 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 CRB3Q9BUF7 120 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 C20orf96Q9NUD7 363 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 UTP6Q9NYH9 597 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 STOX2Q9P2F5 926 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 DHRS7Q9Y394 339 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 MAD1L1Q9Y6D9 718 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 COMMD10Q9Y6G5 202 aa16.73■□□□□ 0.27
SDR39U1-206ENST00000553930 E7ENX8 843 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 GFYI3L273 518 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 EZRP15311 586 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 FBLP22087 321 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 FNTAP49354 379 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 TAP2Q03519 686 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 KLC1Q07866 573 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 MRPL49Q13405 166 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 AGAP7PQ5VUJ5 663 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 ZNF425Q6IV72 752 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 PPIL6Q8IXY8 311 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 CISD2Q8N5K1 135 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 PPFIBP2Q8ND30 876 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 ACTRT1Q8TDG2 376 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 COG1Q8WTW3 980 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 ZNF480Q8WV37 535 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 INPP5DQ92835 1189 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 MVB12AQ96EY5 273 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 SIGLEC10Q96LC7 697 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 AGAP4Q96P64 663 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 LHPPQ9H008 270 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 ASF1BQ9NVP2 202 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 CUEDC1Q9NWM3 386 aaPredicted RBP16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 FBXO5Q9UKT4 447 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 CDC14AQ9UNH5 594 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 CCDC88CQ9P219 2028 aa16.72■□□□□ 0.27
SDR39U1-206ENST00000553930 IGLV3-12A0A075B6K2 115 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 GOLGA6L10A0A0M3HER8 536 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SMAPO00193 183 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 ZBTB14O43829 449 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SEMA7AO75326 666 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SYF2O95926 243 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 ABATP80404 500 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 RELAQ04206 551 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 NR6A1Q15406 480 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 EIF2S3LQ2VIR3 472 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 CRB2Q5IJ48 1285 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 IGFL2Q6UWQ7 119 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 CUZD1Q86UP6 607 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 PARP9Q8IXQ6 854 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 CSNK1A1LQ8N752 337 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 CD200R1Q8TD46 325 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 PPP4R1Q8TF05 950 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SSC4DQ8WTU2 575 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 RERGQ96A58 199 aaPredicted RBP16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 OR2A5Q96R48 311 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 OSBPL9Q96SU4 736 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 GPR21Q99679 349 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 FAM167BQ9BTA0 163 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SYNPO2LQ9H987 977 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 C3orf18Q9UK00 162 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 RUVBL1Q9Y265 456 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 PCDHGA10Q9Y5H3 936 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 SHANK1Q9Y566 2161 aa16.71■□□□□ 0.27
SDR39U1-206ENST00000553930 RP1L1Q8IWN7 2480 aaPredicted RBP16.71■□□□□ 0.26
SDR39U1-206ENST00000553930 EIF3FO00303 357 aaPredicted RBP16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 PRPF4O43172 522 aaKnown RBP eCLIP16.7■□□□□ 0.264e-10■■■■□ 19.7
SDR39U1-206ENST00000553930 HAUS5O94927 633 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 HPP00738 406 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 ACPPP15309 386 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 SKIV2L2P42285 1042 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 DSG2Q14126 1118 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 HKDC1Q2TB90 917 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 HSP90AA5PQ58FG0 334 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 VWA2Q5GFL6 755 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 GARNL3Q5VVW2 1013 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 PRSS58Q8IYP2 241 aa16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.7■□□□□ 0.26
SDR39U1-206ENST00000553930 PRR7Q8TB68 274 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms