RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 TAP2Q03519 686 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 RELAQ04206 551 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 RAPSNQ13702 412 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 MYBPC3Q14896 1274 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 MORF4L2Q15014 288 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 IRAK1BP1Q5VVH5 260 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 FBXO42Q6P3S6 717 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 KIAA0408Q6ZU52 694 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 PPP1R32Q7Z5V6 425 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 ADCK2Q7Z695 626 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 KLHL7Q8IXQ5 586 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 OR4N4Q8N0Y3 316 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 METTL27Q8N6F8 245 aaPredicted RBP16.92■□□□□ 0.3
FOXN3-204ENST00000553840 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 CPT1CQ8TCG5 803 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 MCOLN3Q8TDD5 553 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 TM9SF4Q92544 642 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 CABS1Q96KC9 395 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 NAPGQ99747 312 aaPredicted RBP16.92■□□□□ 0.3
FOXN3-204ENST00000553840 SLAMF7Q9NQ25 335 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
FOXN3-204ENST00000553840 SEMA3GQ9NS98 782 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 VPS4AQ9UN37 437 aa16.92■□□□□ 0.3
FOXN3-204ENST00000553840 PCSK5Q92824 1860 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 PABPN1LA6NDY0 278 aaKnown RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 H0YGG7 62 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 CCDC188H7C350 402 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 C8GP07360 202 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 VARSP26640 1264 aaKnown RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 CD97P48960 835 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 CARSP49589 748 aaKnown RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 ARF3P61204 181 aaPredicted RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 AIMP2Q13155 320 aaKnown RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 JMJD6Q6NYC1 403 aaPredicted RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 CYHR1Q6ZMK1 362 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 COX15Q7KZN9 410 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 PIWIL4Q7Z3Z4 852 aaKnown RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 PAQR7Q86WK9 346 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 CERS2Q96G23 380 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 SPSB2Q99619 263 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 PCBD2Q9H0N5 130 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 SOX17Q9H6I2 414 aaPredicted RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 ZNF282Q9UDV7 671 aaPredicted RBP16.91■□□□□ 0.3
FOXN3-204ENST00000553840 MAU2Q9Y6X3 613 aa16.91■□□□□ 0.3
FOXN3-204ENST00000553840 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 NDC80O14777 642 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 NRP2O60462 931 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 HIST1H2AGP0C0S8 130 aaPredicted RBP16.9■□□□□ 0.3
FOXN3-204ENST00000553840 HIST1H2ADP20671 130 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 FBLP22087 321 aaKnown RBP16.9■□□□□ 0.3
FOXN3-204ENST00000553840 HRH2P25021 359 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 SOX8P57073 446 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 YBX1P67809 324 aaKnown RBP16.9■□□□□ 0.3
FOXN3-204ENST00000553840 SP140Q13342 867 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 RBBP7Q16576 425 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 GARNL3Q5VVW2 1013 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 ZNF425Q6IV72 752 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 GALNT7Q86SF2 657 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CREG2Q8IUH2 290 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CNTN4Q8IWV2 1026 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CSNK1A1LQ8N752 337 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 PNPLA2Q96AD5 504 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 MIEF2Q96C03 454 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 MVB12AQ96EY5 273 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 HIST1H2AHQ96KK5 128 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CCDC138Q96M89 665 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 NDNQ99608 321 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 HIST1H2AJQ99878 128 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 H2AFJQ9BTM1 129 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CCDC177Q9NQR7 707 aaPredicted RBP16.9■□□□□ 0.3
FOXN3-204ENST00000553840 CTSFQ9UBX1 484 aa16.9■□□□□ 0.3
FOXN3-204ENST00000553840 VSTM2BA6NLU5 285 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 SLC16A5O15375 505 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 BANF1O75531 89 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 SORBS2O94875 1100 aaKnown RBP16.89■□□□□ 0.29
FOXN3-204ENST00000553840 ITGA3P26006 1051 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 IVDP26440 423 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 FOXL2P58012 376 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
FOXN3-204ENST00000553840 HIF1AQ16665 826 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 TUBB8Q3ZCM7 444 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 SHISA6Q6ZSJ9 500 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 STT3BQ8TCJ2 826 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 EEF1AKMT1Q8WVE0 214 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 CFAP36Q96G28 342 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 SNF8Q96H20 258 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 CRB3Q9BUF7 120 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 YIPF2Q9BWQ6 316 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 MFRPQ9BY79 579 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 PARVBQ9HBI1 364 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 FBXL4Q9UKA2 621 aa16.89■□□□□ 0.29
FOXN3-204ENST00000553840 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.29
FOXN3-204ENST00000553840 UBR5O95071 2799 aaPredicted RBP16.89■□□□□ 0.29
FOXN3-204ENST00000553840 IGKV1-8A0A0C4DH67 115 aa16.88■□□□□ 0.29
FOXN3-204ENST00000553840 AHSGP02765 367 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms