RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ZC3H7AQ8IWR0 971 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 OR2A1Q8NGT9 310 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ALG3Q92685 438 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 C14orf79Q96F83 325 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF778Q96MU6 729 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ZFYVE21Q9BQ24 234 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 DPH7Q9BTV6 452 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ACAT2Q9BWD1 397 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 CARD6Q9BX69 1037 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 TSSK1BQ9BXA7 367 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 HES7Q9BYE0 225 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF700Q9H0M5 742 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 STMN3Q9NZ72 180 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 TTC7AQ9ULT0 858 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 RUVBL1Q9Y265 456 aaKnown RBP8.62□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF835Q9Y2P0 537 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 PCDHA3Q9Y5H8 950 aa8.62□□□□□ -1.03
SYNE2-209ENST00000553308 CCDC168Q8NDH2 2452 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 IGHV3-20A0A0C4DH32 117 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 PRPF4O43172 522 aaKnown RBP eCLIP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 ZNHIT1O43257 154 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SEC24DO94855 1032 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SLC26A3P40879 764 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MAT1AQ00266 395 aaKnown RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TLE4Q04727 773 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 LONRF1Q17RB8 773 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 HKDC1Q2TB90 917 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 P3H1Q32P28 736 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TSTD2Q5T7W7 516 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 FCRLBQ6BAA4 426 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 FBXO42Q6P3S6 717 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TTC23LQ6PF05 361 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TMEM205Q6UW68 189 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 Q6ZPB1 254 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 LANCL3Q6ZV70 420 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SHISA5Q8N114 240 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 BEST3Q8N1M1 668 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 CSNK1A1LQ8N752 337 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 DNAAF3Q8N9W5 541 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 OR6P1Q8NGX9 317 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 OR4L1Q8NH43 312 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 HMGCLL1Q8TB92 370 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SKA2Q8WVK7 121 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 RAD51AP1Q96B01 352 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MVB12AQ96EY5 273 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MMABQ96EY8 250 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 IMMP1LQ96LU5 166 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 GPR137Q96N19 417 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 SIGLEC12Q96PQ1 595 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TTC1Q99614 292 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MKKSQ9NPJ1 570 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 KLHL1Q9NR64 748 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MARCH4Q9P2E8 410 aaPredicted RBP8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MKL2Q9ULH7 1088 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 CDC14AQ9UNH5 594 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 MEMO1Q9Y316 297 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 CACNA1CQ13936 2221 aa8.61□□□□□ -1.03
SYNE2-209ENST00000553308 A0A0A6YYC8 382 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 IGKV1-8A0A0C4DH67 115 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 RCCD1A6NED2 376 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 A8MUI8 341 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 NPIPA5E9PKD4 350 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 I3L1I5 382 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PRMT5O14744 637 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 P2RX6O15547 441 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PSMD3O43242 534 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CBFA2T2O43439 604 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 FOXS1O43638 330 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 TJP3O95049 919 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ANXA5P08758 320 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 C8orf89P0DMQ9 161 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 MYBL2P10244 700 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ICAM2P13598 275 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CAPN3P20807 821 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CMPK1P30085 196 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 GRIA1P42261 906 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 EMP3P54852 163 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 RWDD2BP57060 319 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 AP2B1P63010 937 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CSNK1G2P78368 415 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PRAMEP78395 509 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ALDH6A1Q02252 535 aaKnown RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ACVR1Q04771 509 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CDH17Q12864 832 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 FASTKD1Q53R41 847 aaKnown RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PTRHD1Q6GMV3 140 aaKnown RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 LRRC8BQ6P9F7 803 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 SUSD1Q6UWL2 747 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 C3P1Q6ZMU1 363 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 LINC00523Q86TU6 105 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 SPPL2CQ8IUH8 684 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 RAB42Q8N4Z0 105 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 MDS2Q8NDY4 140 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms