RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	SLC6A17	Q9H1V8	727 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	SEMA6A	Q9H2E6	1030 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PIF1	Q9H611	641 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	COQ10B	Q9H8M1	238 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	TM7SF3	Q9NS93	570 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	VPS29	Q9UBQ0	182 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	RAB26	Q9ULW5	256 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PLAGL1	Q9UM63	463 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	RUVBL1	Q9Y265	456 aa	Known RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	ASF1A	Q9Y294	204 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCDHGA11	Q9Y5H2	935 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	AP4B1	Q9Y6B7	739 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	AK5	Q9Y6K8	562 aa		11.12	□□□□□ -0.63
RAB5C-208	ENST00000551338	PIPSL	A2A3N6	862 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338		A6NHS1	94 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	FAM220BP	B1ANY3	271 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	TXNDC9	O14530	226 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	KMO	O15229	486 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	HNRNPR	O43390	633 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	DENR	O43583	198 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	RNGTT	O60942	597 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ADAM23	O75077	832 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ERN1	O75460	977 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	LYN	P07948	512 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	UMPS	P11172	480 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	PIM1	P11309	404 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	HOXB2	P14652	356 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	KEL	P23276	732 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	PSMA4	P25789	261 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	TRIM23	P36406	574 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	CDKN2C	P42773	168 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	POLE2	P56282	527 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	WNT3	P56703	355 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	FOLH1	Q04609	750 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ACSM2A	Q08AH3	577 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	TSTA3	Q13630	321 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	SF1	Q15637	639 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	AASDH	Q4L235	1098 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	TMEM259	Q4ZIN3	620 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRAMEF14	Q5SWL7	426 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRAMEF13	Q5VWM6	474 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ATG9B	Q674R7	924 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ACSM2B	Q68CK6	577 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	KIAA1161	Q6NSJ0	714 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	TMEM154	Q6P9G4	183 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	NXPE4	Q6UWF7	544 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	CALHM3	Q86XJ0	350 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	SYT12	Q8IV01	421 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	C1orf52	Q8N6N3	182 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	IL17RC	Q8NAC3	791 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	PHC3	Q8NDX5	983 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	DNAJB8	Q8NHS0	232 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	CHTF18	Q8WVB6	975 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLC5A11	Q8WWX8	675 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	RAD51AP1	Q96B01	352 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	BIRC7	Q96CA5	298 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	NSMCE2	Q96MF7	247 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	CCDC115	Q96NT0	180 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	EFCAB11	Q9BUY7	163 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	REXO4	Q9GZR2	422 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	MKRN2	Q9H000	416 aa	Known RBP	11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	EHD1	Q9H4M9	534 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	WDR26	Q9H7D7	661 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	AGPAT4	Q9NRZ5	378 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	FBXL12	Q9NXK8	326 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	ANAPC2	Q9UJX6	822 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338	AURKC	Q9UQB9	309 aa		11.11	□□□□□ -0.63
RAB5C-208	ENST00000551338		A0A1W2PQF6	199 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338		A0A1W2PQU0	124 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	C7orf72	A4D263	438 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRR23A	A6NEV1	266 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GPR89A	B7ZAQ6	455 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338		H0YJX3	145 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	AKAP10	O43572	662 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SCN2B	O60939	215 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	SH3BGRL	O75368	114 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	KLF8	O95600	359 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	FUCA1	P04066	466 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	ANXA6	P08133	673 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GPR89B	P0CG08	455 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MYCLP1	P12525	358 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	BMP2	P12643	396 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	CDH1	P12830	882 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PRPS1L1	P21108	318 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	IL10	P22301	178 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	TIA1	P31483	386 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GZMM	P51124	257 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	DMPK	Q09013	629 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	MED21	Q13503	144 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PON2	Q15165	354 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	CYP51A1	Q16850	503 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	DPY19L1	Q2PZI1	675 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	PGS1	Q32NB8	556 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	METRNL	Q641Q3	311 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	DUS1L	Q6P1R4	473 aa	Known RBP	11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	EP400NL	Q6ZTU2	488 aa		11.1	□□□□□ -0.63
RAB5C-208	ENST00000551338	GPR180	Q86V85	440 aa		11.1	□□□□□ -0.63

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