RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PCDHA3Q9Y5H8 950 aa6.54□□□□□ -1.36
PRPF40B-214ENST00000551320 C2CD3Q4AC94 2353 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 C17orf113A0A1B0GUU1 675 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 MROH6A6NGR9 719 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 PRSS44E7EML9 344 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CBFA2T2O43439 604 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 MST1P26927 711 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CTNNA1P35221 906 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CD151P48509 253 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CARSP49589 748 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 KRTAP10-9P60411 292 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 KLC1Q07866 573 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF169Q14929 603 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 TCEAL1Q15170 157 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 SF1Q15637 639 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 RBBP7Q16576 425 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 SPRED3Q2MJR0 410 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 GPR33Q49SQ1 333 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 WASHC2DQ5SRD0 308 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CNSTQ6PJW8 725 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 IGFL3Q6UXB1 125 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 OVCH1Q7RTY7 1134 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 MCEMP1Q8IX19 187 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 TBC1D21Q8IYX1 336 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 PPFIBP2Q8ND30 876 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 OR5K2Q8NHB8 316 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 DENND1AQ8TEH3 1009 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 SKA2Q8WVK7 121 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 ZFPM2Q8WW38 1151 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 C1orf54Q8WWF1 131 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 SREK1Q8WXA9 508 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 IQCDQ96DY2 449 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 CCDC138Q96M89 665 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 BARD1Q99728 777 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 WDR77Q9BQA1 342 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 AP1M1Q9BXS5 423 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 HES7Q9BYE0 225 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 ANKRD10Q9NXR5 420 aa6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 TTC7AQ9ULT0 858 aaPredicted RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 AAR2Q9Y312 384 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 MRPS2Q9Y399 296 aaKnown RBP6.53□□□□□ -1.36
PRPF40B-214ENST00000551320 A0A096LPE4 126 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 A0A1B0GX78 115 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 A0A1W2PPZ6 126 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C19orf84I3L1E1 186 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 MATN2O00339 956 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 DSCR3O14972 297 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 AP2A1O95782 977 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 IFNB1P01574 187 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 ALPPP05187 535 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 PTMAP06454 111 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 TPM1P09493 284 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 ITGAMP11215 1152 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 CD9P21926 228 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 MMP11P24347 488 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 GSTT1P30711 240 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 HADHAP40939 763 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 HADHBP55084 474 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 SESN2P58004 480 aaPredicted RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 AIMP2Q13155 320 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 TRIM14Q14142 442 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 ZRSR2Q15696 482 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC5A12Q1EHB4 618 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 PARP6Q2NL67 630 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 HKDC1Q2TB90 917 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 AGAP7PQ5VUJ5 663 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C11orf63Q6NUN7 778 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C3P1Q6ZMU1 363 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 PRSS41Q7RTY9 318 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 CARFQ8N187 725 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 LRRC57Q8N9N7 239 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 DNAAF3Q8N9W5 541 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 ST6GALNAC3Q8NDV1 305 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 STT3BQ8TCJ2 826 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 BRIX1Q8TDN6 353 aaKnown RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 FAR1Q8WVX9 515 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 PSMF1Q92530 271 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C10orf90Q96M02 699 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 AGAP4Q96P64 663 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 SELENOSQ9BQE4 189 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 CRB3Q9BUF7 120 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 ARNT2Q9HBZ2 717 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 CHRAC1Q9NRG0 131 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C5AR2Q9P296 337 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 LCMT1Q9UIC8 334 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 C3orf18Q9UK00 162 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 INTUQ9ULD6 942 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 AP1M2Q9Y6Q5 423 aa6.52□□□□□ -1.37
PRPF40B-214ENST00000551320 SCN2AQ99250 2005 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 SCN3AQ9NY46 2000 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 A0A0A6YYC8 382 aaPredicted RBP6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 TRGV8A0A0C4DH27 118 aa6.51□□□□□ -1.37
PRPF40B-214ENST00000551320 A0A1W2PPV9 198 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms