RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	GFPT1	Q06210	699 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GABPB1	Q06547	395 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CXCL9	Q07325	125 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PTPRCAP	Q14761	206 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SGCB	Q16585	318 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	KRT71	Q3SY84	523 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FILIP1L	Q4L180	1135 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TMEM35A	Q53FP2	167 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPATA46	Q5T0L3	261 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	C18orf63	Q68DL7	685 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TOM1L2	Q6ZVM7	507 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ABI3BP	Q7Z7G0	1075 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	OR10S1	Q8NGN2	331 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	OR5R1	Q8NH85	324 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CFAP61	Q8NHU2	1237 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CASP10	Q92851	521 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RHBDF1	Q96CC6	855 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FBXO17	Q96EF6	278 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SGF29	Q96ES7	293 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DTNBP1	Q96EV8	351 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZNF830	Q96NB3	372 aa	Predicted RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZNF558	Q96NG5	402 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SSX3	Q99909	188 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ERP44	Q9BS26	406 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MAGIX	Q9H6Y5	334 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NOL11	Q9H8H0	719 aa	Known RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPG21	Q9NZD8	308 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPAST	Q9UBP0	616 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZNF148	Q9UQR1	794 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	WBP11	Q9Y2W2	641 aa	Known RBP	4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	OR2W1	Q9Y3N9	320 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ACE	P12821	1306 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TTC21B	Q7Z4L5	1316 aa		4.37	□□□□□ -1.71
ATP2B1-208	ENST00000551009		A0A1B0GWJ7	208 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	LNP1	A1A4G5	178 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	LRRIQ4	A6NIV6	560 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009		L7N2F9	121 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009		M0QX08	132 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009		M0QZ24	198 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SMAD9	O15198	467 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CLDN3	O15551	220 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPRY1	O43609	319 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	JRK	O75564	520 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	IDH1	O75874	414 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	AKR7A3	O95154	331 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RLN1	P04808	185 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	KRT8	P05787	483 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ABHD2	P08910	425 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CFC1B	P0CG36	223 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CFC1	P0CG37	223 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FAM106CP	P0CH98	169 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MMP9	P14780	707 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GJA1	P17302	382 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	EEF1B2	P24534	225 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SFN	P31947	248 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CHRNA3	P32297	505 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	APOBEC1	P41238	236 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CD151	P48509	253 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PITPNB	P48739	271 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CLCN3	P51790	818 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RBPJ	Q06330	500 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CHIT1	Q13231	466 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MAD2L1	Q13257	205 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GPM6B	Q13491	265 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	UGP2	Q16851	508 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FASTKD1	Q53R41	847 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ATAD3B	Q5T9A4	648 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	C6orf163	Q5TEZ5	329 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZNF852	Q6ZMS4	543 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	KCTD8	Q6ZWB6	473 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SLC26A9	Q7LBE3	791 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TLK2	Q86UE8	772 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GPR180	Q86V85	440 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	UNC5CL	Q8IV45	518 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CFAP206	Q8IYR0	622 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PM20D2	Q8IYS1	436 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	BATF2	Q8N1L9	274 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	LRRC43	Q8N309	656 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SLC24A4	Q8NFF2	622 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPACA9	Q96E40	222 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	C14orf79	Q96F83	325 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RRNAD1	Q96FB5	475 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SCRN2	Q96FV2	425 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GDAP1L1	Q96MZ0	367 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CDRT15	Q96T59	188 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SEPT5	Q99719	369 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SEMA3C	Q99985	751 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CARD6	Q9BX69	1037 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TFB2M	Q9H5Q4	396 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	COQ10B	Q9H8M1	238 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SEBOX	Q9HB31	216 aa	Predicted RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PPAN	Q9NQ55	473 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CENPM	Q9NSP4	180 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DDX18	Q9NVP1	670 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms