RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LMO1P25800 156 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 CDC25AP30304 524 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 RFX2P48378 723 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PEX5P50542 639 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 NAGLUP54802 743 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 CRYZQ08257 329 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE1Q13065 139 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GAGE4Q13068 117 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 TAZQ16635 292 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 TDRD12Q587J7 1177 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 LRRC73Q5JTD7 316 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 EFHC1Q5JVL4 640 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GLRA4Q5JXX5 417 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 MFSD12Q6NUT3 480 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 ZNF449Q6P9G9 518 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PSRC1Q6PGN9 363 aaPredicted RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 TMPRSS11FQ6ZWK6 438 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 GLCCI1Q86VQ1 547 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 RNF113BQ8IZP6 322 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 OR5R1Q8NH85 324 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 SYN2Q92777 582 aaPredicted RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PTP4A1Q93096 173 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PIGTQ969N2 578 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 ZNF582Q96NG8 517 aaPredicted RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 LRRC3BQ96PB8 259 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 SLC22A12Q96S37 553 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PCYT2Q99447 389 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 LMF2Q9BU23 707 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 ACAT2Q9BWD1 397 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 DCLK3Q9C098 648 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 PCDH9Q9HC56 1237 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 NPAP1Q9NZP6 1156 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 AGO1Q9UL18 857 aaKnown RBP5.08□□□□□ -1.6
CPSF6-206ENST00000550987 LIPT1Q9Y234 373 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 AMDHD2Q9Y303 409 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 COL4A1P02462 1669 aa5.08□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1W2PP64 1363 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 PSME4Q14997 1843 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ITPR2Q14571 2701 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ELOVL7A1L3X0 281 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 LINC01553A4QN01 128 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 FAM86B1E9PN63 330 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 H3BNX3 289 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 SLC33A1O00400 549 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 KCNJ13O60928 360 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 KERAO60938 352 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 KRT19P08727 400 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 FAM86B2P0C5J1 330 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 CETPP11597 493 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ADRA2CP18825 462 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 GNAZP19086 355 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 CD38P28907 300 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 CORO1AP31146 461 aaKnown RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TMPOP42166 694 aaKnown RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ALDH3A2P51648 485 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 HNRNPKP61978 463 aaKnown RBP eCLIP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 POLR2LP62875 67 aaKnown RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TRAF2Q12933 501 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 UGCGQ16739 394 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TYSND1Q2T9J0 566 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 C2orf76Q3KRA6 126 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ODF3L2Q3SX64 289 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 XKR9Q5GH70 373 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TCTE1Q5JU00 501 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 DPY19L2P1Q6NXN4 242 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 FAM122CQ6P4D5 195 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ENPP7Q6UWV6 458 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 GET4Q7L5D6 327 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 PIP4P1Q86T03 277 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 COMMD2Q86X83 199 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 FAM219AQ8IW50 185 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 GBGT1Q8N5D6 347 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 C9orf43Q8TAL5 461 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 SLC38A5Q8WUX1 472 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 HEXDCQ8WVB3 486 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 SMPDL3BQ92485 455 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 NSMAFQ92636 917 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 MOB3AQ96BX8 217 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 CPNE1Q99829 537 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 SPRTNQ9H040 489 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TRPV4Q9HBA0 871 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 IL1RAPL2Q9NP60 686 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ZBTB40Q9NUA8 1239 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 TCP11L1Q9NUJ3 509 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 MIOSQ9NXC5 875 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 MOSPD1Q9UJG1 213 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 LEF1Q9UJU2 399 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 MTUS1Q9ULD2 1270 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 NAP1L2Q9ULW6 460 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 NME7Q9Y5B8 376 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 NFS1Q9Y697 457 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 STAB1Q9NY15 2570 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 OTOGQ6ZRI0 2925 aa5.07□□□□□ -1.6
CPSF6-206ENST00000550987 COL5A1P20908 1838 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-206ENST00000550987 ROCK2O75116 1388 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CEMIPQ8WUJ3 1361 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 ZNF804BA4D1E1 1349 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms