RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SGPP1Q9BX95 441 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 VPS11Q9H270 941 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 ALG9Q9H6U8 611 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 GPN2Q9H9Y4 310 aaPredicted RBP13.18□□□□□ -0.3
TROAP-213ENST00000550709 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 SNX7Q9UNH6 387 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 PKD1L2Q7Z442 2459 aa13.18□□□□□ -0.3
TROAP-213ENST00000550709 A0A087X1B8 175 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 A0A096LPK6 155 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 OR2A25A4D2G3 310 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 TRIM49D1C9J1S8 452 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 HAT1O14929 419 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
TROAP-213ENST00000550709 KRT38O76015 456 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 MT-ND3P03897 115 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 ANXA5P08758 320 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 LTA4HP09960 611 aaKnown RBP13.17□□□□□ -0.3
TROAP-213ENST00000550709 CDH1P12830 882 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 TNFRSF8P28908 595 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 STAT5AP42229 794 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 KCNC1P48547 511 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 PTCHD3Q3KNS1 767 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 FBXO48Q5FWF7 155 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 FRMPD2BQ6IN97 320 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 PAQR7Q86WK9 346 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 C17orf64Q86WR6 236 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 OR56A3Q8NH54 315 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 TSNARE1Q96NA8 513 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 EPB41L4BQ9H329 900 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 NMRAL1Q9HBL8 299 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 DHCR7Q9UBM7 475 aaKnown RBP13.17□□□□□ -0.3
TROAP-213ENST00000550709 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 RNF112Q9ULX5 631 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 KLK4Q9Y5K2 254 aa13.17□□□□□ -0.3
TROAP-213ENST00000550709 DSPP15924 2871 aaKnown RBP13.16□□□□□ -0.3
TROAP-213ENST00000550709 MEN1O00255 615 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 KATNA1O75449 491 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 KRT37O76014 449 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 STATHP02808 62 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 KLK3P07288 261 aaPredicted RBP13.16□□□□□ -0.3
TROAP-213ENST00000550709 NPPBP16860 134 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 TCN2P20062 427 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ALAS2P22557 587 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 CCND1P24385 295 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 DLSTP36957 453 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 GDF5P43026 501 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 GLRBP48167 497 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 UCNP55089 124 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 CDKL1Q00532 357 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 MAP7Q14244 749 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 TGFBIQ15582 683 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 FAM83EQ2M2I3 478 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 WASHC2DQ5SRD0 308 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ZNF425Q6IV72 752 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 LCN10Q6JVE6 187 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ISCA2Q86U28 154 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
TROAP-213ENST00000550709 CT55Q8WUE5 264 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 KIAA1191Q96A73 305 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 OR4K3Q96R72 315 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ZFYVE21Q9BQ24 234 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 HAUS8Q9BT25 410 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 NDC1Q9BTX1 674 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 PCMTD2Q9NV79 361 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 WWOXQ9NZC7 414 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ANKMY1Q9P2S6 941 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 NDOR1Q9UHB4 597 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 ZNF180Q9UJW8 692 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 MRPS18BQ9Y676 258 aaKnown RBP13.16□□□□□ -0.3
TROAP-213ENST00000550709 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 LAMA5O15230 3695 aa13.16□□□□□ -0.3
TROAP-213ENST00000550709 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 SUPT3HB4E1H0 165 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 H0YGG7 62 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 H3BMH7 237 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 SUPT3HO75486 399 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 WDR47O94967 919 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
TROAP-213ENST00000550709 SHBGP04278 402 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 SNRPAP09012 282 aaKnown RBP13.15□□□□□ -0.3
TROAP-213ENST00000550709 HBQ1P09105 142 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 F8A1P23610 371 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 GCAP28676 217 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 ARF3P61204 181 aaPredicted RBP13.15□□□□□ -0.3
TROAP-213ENST00000550709 VAC14Q08AM6 782 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 LCTLQ6UWM7 567 aa13.15□□□□□ -0.3
TROAP-213ENST00000550709 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms