RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CIDEBQ9UHD4 219 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 PCDHGB6Q9Y5F9 930 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 DCHS2Q6V1P9 2916 aa9.37□□□□□ -0.91
TRAFD1-207ENST00000550051 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 A0A0J9YVX5 310 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 OR5H15A6NDH6 313 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 GOLGA6L9A6NEM1 432 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 BTNL10A8MVZ5 291 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 H0YGG7 62 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 PRMT5O14744 637 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 PHF2O75151 1096 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 CAPN3P20807 821 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 FBLP22087 321 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 STIP1P31948 543 aaKnown RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 CCNFP41002 786 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ARF3P61204 181 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 RBPJQ06330 500 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 KLF1Q13351 362 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 SEMA3AQ14563 771 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TMED2Q15363 201 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 GARNL3Q5VVW2 1013 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 H3F3CQ6NXT2 135 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 CNSTQ6PJW8 725 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TMEM205Q6UW68 189 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TAX1BP1Q86VP1 789 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 PRSS58Q8IYP2 241 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 SIRT6Q8N6T7 355 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TC2NQ8N9U0 490 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 DNAAF3Q8N9W5 541 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 OR6P1Q8NGX9 317 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 SUN3Q8TAQ9 357 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 LKAAEAR1Q8TD35 194 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ADAMTS18Q8TE60 1221 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 THAP3Q8WTV1 239 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 C10orf90Q96M02 699 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ZNF778Q96MU6 729 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ZFYVE21Q9BQ24 234 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TMEM121Q9BTD3 319 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 P2RY12Q9H244 342 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 MKKSQ9NPJ1 570 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 C14orf105Q9NVL8 296 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 STOX2Q9P2F5 926 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TRPC4Q9UBN4 977 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ZNF835Q9Y2P0 537 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 ADGRG4Q8IZF6 3080 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 MED13LQ71F56 2210 aa9.36□□□□□ -0.91
TRAFD1-207ENST00000550051 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 SLC19A2O60779 497 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 MATN4O95460 622 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 EIF2S1P05198 315 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 HEXBP07686 556 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ITGAMP11215 1152 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ERGP11308 486 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 PSMB5P28074 263 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 CMPK1P30085 196 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 SSTR2P30874 369 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 TTPAP49638 278 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 SMSP52788 366 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 GDF10P55107 478 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 CASP6P55212 293 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 YBX1P67809 324 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 PRAMEP78395 509 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ADORA2A-AS1P86434 159 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 PCOLCEQ15113 449 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 TESK1Q15569 626 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 CCSMST1Q4G0I0 132 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 KRTCAP3Q53RY4 240 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 AARS2Q5JTZ9 985 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ABHD17BQ5VST6 288 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 PTRHD1Q6GMV3 140 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 Q6ZPB1 254 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 KRT222Q8N1A0 295 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ARHGEF39Q8N4T4 335 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 AMER3Q8N944 861 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 LRRC57Q8N9N7 239 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 CABS1Q96KC9 395 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 DPH7Q9BTV6 452 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 TUBB6Q9BUF5 446 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 SPATA7Q9P0W8 599 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 TEKT2Q9UIF3 430 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 ANAPC5Q9UJX4 755 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 NFS1Q9Y697 457 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 EPN1Q9Y6I3 576 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 HIVEP1P15822 2718 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 TACC2O95359 2948 aa9.35□□□□□ -0.91
TRAFD1-207ENST00000550051 CELSR1Q9NYQ6 3014 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 TXNDC9O14530 226 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 CD3EAPO15446 510 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 FOXS1O43638 330 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms