RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 NATD1Q8N6N6 113 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SETD9Q8NE22 299 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 ZNF420Q8TAQ5 688 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 FBXO30Q8TB52 745 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 WDR20Q8TBZ3 569 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SETD7Q8WTS6 366 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SMG7Q92540 1137 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SNX19Q92543 992 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 PYCR2Q96C36 320 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 NMD3Q96D46 503 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 WDR34Q96EX3 536 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 MED8Q96G25 268 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 APIPQ96GX9 242 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 LINC00615Q96LM1 132 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TRIM8Q9BZR9 551 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 RBM38Q9H0Z9 239 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DPEP2Q9H4A9 486 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TRIM39Q9HCM9 518 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SERHLQ9NQF3 203 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SIRT5Q9NXA8 310 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SLC25A37Q9NYZ2 338 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 AHSPQ9NZD4 102 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 VPS4AQ9UN37 437 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 PCDHGB4Q9UN71 923 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DLGAP4Q9Y2H0 992 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 WBP11Q9Y2W2 641 aaKnown RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 TSC22D4Q9Y3Q8 395 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 PCDHB14Q9Y5E9 798 aa8.67□□□□□ -1.02
TMEM116-209ENST00000550020 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-209ENST00000550020 SCN8AQ9UQD0 1980 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 GPR89AB7ZAQ6 455 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CLIC1O00299 241 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SCAMP2O15127 329 aaKnown RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PI15O43692 258 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 UGT2B11O75310 529 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 MTX2O75431 263 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PRKD3O94806 890 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SERPINA1P01009 418 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 IFNA14P01570 189 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 ALPLP05186 524 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 ANXA4P09525 319 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 GPR89BP0CG08 455 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PCNAP12004 261 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CEBPBP17676 345 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 GPX2P18283 190 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CXCR2P25025 360 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PTX3P26022 381 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 HLCSP50747 726 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 GABARAPL2P60520 117 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PLIN5Q00G26 463 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 E2F2Q14209 437 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 ELOAQ14241 798 aaKnown RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 GK3PQ14409 553 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PON2Q15165 354 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 LRRC73Q5JTD7 316 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 OTUD3Q5T2D3 398 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CPTPQ5TA50 214 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 THEMIS2Q5TEJ8 643 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 BROXQ5VW32 411 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 FAM219BQ5XKK7 198 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CPZQ66K79 652 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SERPINA13PQ6UXR4 307 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM26Q6ZUK4 368 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 IKBIPQ70UQ0 350 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PARS2Q7L3T8 475 aaKnown RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 THAP5Q7Z6K1 395 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SLC30A8Q8IWU4 369 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 MSRB3Q8IXL7 192 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SYTL1Q8IYJ3 562 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 KRT78Q8N1N4 520 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CPA6Q8N4T0 437 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 METTL25Q8N6Q8 603 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PJA1Q8NG27 643 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 OR9A1PQ8NGU1 263 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CLHC1Q8NHS4 586 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 CXorf40AQ8TE69 158 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SUSD6Q92537 303 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 HDAC2Q92769 488 aaKnown RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 BADQ92934 168 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 RAD51AP1Q96B01 352 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 MTERF3Q96E29 417 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 HIC2Q96JB3 615 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 MPP4Q96JB8 637 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PKP4Q99569 1192 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TBCDQ9BTW9 1192 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 DUSP26Q9BV47 211 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 BHLHE41Q9C0J9 482 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 SFXN1Q9H9B4 322 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TM9SF3Q9HD45 589 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 AASDHPPTQ9NRN7 309 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 ADPRHL2Q9NX46 363 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 TMEM9Q9P0T7 183 aa8.66□□□□□ -1.02
TMEM116-209ENST00000550020 ZNF282Q9UDV7 671 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-209ENST00000550020 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms