RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 VPS4BO75351 444 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ULK1O75385 1050 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 AMD1P17707 334 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 PEBP1P30086 187 aaKnown RBP16.76■□□□□ 0.27
LETMD1-220ENST00000549686 SERPINB1P30740 379 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 NBL1P41271 181 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 GPLD1P80108 840 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 IFT88Q13099 833 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 SLC14A1Q13336 389 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 CLEC6AQ6EIG7 209 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 MED27Q6P2C8 311 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 EPGNQ6UW88 154 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 TBC1D19Q8N5T2 526 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 CCDC197Q8NCU1 140 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 OR2L3Q8NG85 312 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 OR4K1Q8NGD4 311 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 OR10G6Q8NH81 332 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 RFWD2Q8NHY2 731 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 JPH3Q8WXH2 748 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-220ENST00000549686 NAT6Q93015 286 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ACAT2Q9BWD1 397 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 RAB33BQ9H082 229 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ELOVL6Q9H5J4 265 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 NT5DC2Q9H857 520 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 MEAF6Q9HAF1 191 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 TMEM184CQ9NVA4 438 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 SPHK1Q9NYA1 384 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ADGRE2Q9UHX3 823 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 DCTN4Q9UJW0 460 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 SNX7Q9UNH6 387 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ARL2BPQ9Y2Y0 163 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 RNF215Q9Y6U7 377 aa16.76■□□□□ 0.27
LETMD1-220ENST00000549686 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 ARHGEF17Q96PE2 2063 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 A0A0G2JND7 137 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 LNP1A1A4G5 178 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 SERTM1A2A2V5 107 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 GSAPA4D1B5 854 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 TMEM233B4DJY2 109 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 TRIM38O00635 465 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 ZNF195O14628 629 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 SIGLEC6O43699 453 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 PROS1P07225 676 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CDH1P12830 882 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 POLR2CP19387 275 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 GSTM2P28161 218 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 GRK3P35626 688 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 GRK6P43250 576 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CAPZBP47756 277 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 DUSP3P51452 185 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 FOXA1P55317 472 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 PHEXP78562 749 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 ZRSR2Q15696 482 aaKnown RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CCDC6Q16204 474 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 PDCD2Q16342 344 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CPSF6Q16630 551 aaKnown RBP eCLIP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 FRG2Q64ET8 278 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 ACAD11Q709F0 780 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 FAM129CQ86XR2 697 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CACNA2D3Q8IZS8 1091 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 DCBLD1Q8N8Z6 715 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 USP7Q93009 1102 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 APOLD1Q96LR9 279 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 FRG2BQ96QU4 278 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 OR2A14Q96R47 310 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 KCNA7Q96RP8 456 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 TBC1D10AQ9BXI6 508 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 NUF2Q9BZD4 464 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 RABEP2Q9H5N1 569 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 KCNK13Q9HB14 408 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 RIC8BQ9NVN3 520 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 GEMIN8Q9NWZ8 242 aaKnown RBP16.75■□□□□ 0.27
LETMD1-220ENST00000549686 EPHA6Q9UF33 1036 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 FIS1Q9Y3D6 152 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 KLK4Q9Y5K2 254 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 PI4KAP42356 2102 aa16.75■□□□□ 0.27
LETMD1-220ENST00000549686 SLC28A1O00337 649 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 MANBAO00462 879 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 FLRT2O43155 660 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 RRP9O43818 475 aaKnown RBP16.74■□□□□ 0.27
LETMD1-220ENST00000549686 PRAMEF4O60810 478 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
LETMD1-220ENST00000549686 HSD3B1P14060 373 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 UGT2B7P16662 529 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 HSD3B2P26439 372 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 VARSP26640 1264 aaKnown RBP16.74■□□□□ 0.27
LETMD1-220ENST00000549686 PSMB5P28074 263 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 IDH3AP50213 366 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 REEP5Q00765 189 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 RELAQ04206 551 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 BTKQ06187 659 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 SLBPQ14493 270 aaKnown RBP eCLIP16.74■□□□□ 0.27
LETMD1-220ENST00000549686 CATSPEREQ5SY80 951 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 PRAMEF9Q5VWM5 478 aa16.74■□□□□ 0.27
LETMD1-220ENST00000549686 TCEAL6Q6IPX3 200 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms